Contig Data
morexGenes
Links



Map Locations of contig_103333 (5300 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_103333

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_477 3 4582 bp MLOC_477.3 Available Available LOC_Os04g43800.1, FRAME:-3, EVALUE:0.0, 13104.m04357 protein phenylalanine ammonia-lyase, putative, expressed





CDS Structure of MLOC_477






Contig Sequence (5300 bp)

>contig_103333 5300 assembly3_WGSMorex_rbca.fasta
TGAGGGGGGGTGTTAGAGTTATAATACAACTCATGTACCCTTTTGTATTTATCCCAATAT
ATAAGGGGTTTTCCTGCATATAGTCCATAACCTGTACATGTATATATATTGGCCATGGCC
TCATGGTAATACTAAGTTGCTTATTCCTAACAAACTGTAGGTCTAGTCCTTGCCATGCCC
GCTCGGCGTTCGTCACACGGCGTTCGTCACATCCATCGCAGACGAAGCGCCAGACCGGTG
CGCTCCAGATCGCGGATCTTGTTATTTAATATCAATAGTATGTAAGCACTTCTGTAACCG
ACAGTATCGCCTTACAGAGCTGTATGGAATGGTTACCAAATGCGATATGTTAACTCACGG
ATTGTTTCAGGCATTCAAGGCGTTGATAAAGAAAGTAAAGAGCTGGAAGGAAAAATGCAG
ATTGCTCCCGTTATTAACTAACAGTTTTTTGATAATTTTCTGCAATTCCGGCCAAGTATT
GTGGCCGAATGCTTCCATCTCACTGACTTAATCTGCTTCTTTGTCTGGTACCTTAAACGG
AAACTTCTTAAGTTATTCAGCACTTTCAATCGAACAACAGTTAGGTCTTCCTGCCCACCT
GCGTTTTATCAAGTTATTTTTGGTTAATACCACCCCTTTGTGTATAAACCACATAAAGAT
TTTAATCCTTAGAAGCACTTTGATATTTCAAATGTTGACTCACGGATTGTTTCAGGCATT
TAAGGAGTTGATAAAGAAAGTAAAGAGCTGGAATAAAAAACACAGTTTGCTCCCGTTATT
AACTGACAGGTTTTGGATAATTTTCTGCAATTCTGGCCAAGTAGTGTGGCCGAATGCTTC
CATCTCACTGACTTTATCTGCTTCTTTGTCAGGTACCTTAAAAAGAAACTTCTTAAGTTC
TTCAGCACTTACAATCGAACAGAAGACAGTGAGAAAACACTTCTCAACTTATCCTTCAGT
CATCAGCCTATCTTTCCCTCAGTTCATCCCAATTCATATTTCTGACACATTTTGGCTGTC
CGTTTTTGTTTTCCTCAGGTTAGTAGCAGCTATCTGGTTGTGCTCGCACAGCGGATTATA
AAGAGGTTATACCTGGACTTGGAGAAAATGACAGTGTGGCAGATGTGAGTATCAGCATAT
TTTCCTCAGGTTAGTATCAGACTTGGATAAAGAAACATGGGTCTGATTAGTTTCTGTGAC
TAGTTCATATGTGCTGAACTCCTGTATATATCCTCTCCTGCTTACTGTTTTTTTTTTCTC
TCTGTGAATTATTTCTATCACTACTCCCTTCCCTTCTTGTGCCGGAACATGTATGATACT
AACGTAAATTGTTCGAGAATGTGCTTGTATGACAATCACAACCTGGTGGTATTTCTCTCT
ATTGCAATGCGACGTGATAACTACATACAGCAAGTCTGAGCGTGCTGATTCAGTAGTAGA
CTGGTTTCTTTGGACATTTTTCAAGAATATCAACATTTGTCAGGAAAATTTGTGCCCTTT
CGCTTACACCATCACAAGCTCTAGTTGCTACGTGGCGCCACAAGTATTGCAGAGTGCAAT
CTTTGCAACATATTAGGAGAGGGAAAAAATGAAATCGAACACAAGTATTGTCAATTTAGA
ACATGTGGAGCCTTTCAGAGTTCTGAAGCACAGCATTATCTTCTCTTCATCTCCTTGTTT
AGCAGATAGGCAGAGGCTCGCCATTCCACTCCTTGAGGCATTCCAGCAGCGCGTCGATGT
GCTTGCCCTGGTTCATGGCAACAAACACCTTGTCCACCTCCTCCCCGGGTGACCGTGTCT
TCTCTCCTGTCAAGTACACCGTTCCCAGCTCCTCGCGCACGAACCGGTATAGAGGGTACG
ATCGGCAGTCAGTGATACGGTTCGGTTCTGCAGCGGTGCCATTCTCCACCGCACCTCTAG
CAGCCTCAACCTCCTGAGGCAGTGCCGCGTAGAGCTCCTGCTCGAATGTGGCAACCTTGG
CAAACACCGAGGTCTCCACGTTGTGCTCGGCCTCACCGTTGGCCAAGGCATGCTCCACCA
ACACCGCACGCATCTTCTTCATGAGAGGGTAGTTGGCGCTGCAAGGGTCGTCCGCGTATG
CAAACACCGCCTCGCGGTCGATTGTTTGAAGCAGGTCCTTCTCACAAAAACGCGCGTTGT
GAAGGCCGCCCATGCCATTTGTGATCAGGGTCTTCCTGGCCACTCTTGTGACACAATTCT
TGACGGCGTTCTTGACATTCTCCTCGAGGTGGCGTAGGTCGATGGCTTGGCACAACGCAA
CCAAAAATGTAGAGGACATGAGCTTCAGAATGTCGATGGCCTCGGCAGTCTTCCGGGCCG
AGATTAATCCGAGGGAGTTAACATCTTGATTGTGTTGCTCCGCACTCTGGACATGGTTGG
TCACTGGGTTGCCCAAGAATTGGAGCTCCGAGCAGTATGAAGCCATGGCGATCTCGGCAC
CCTTGAAGCCATAGTCCAGGCTTGGGTTGCGGCCACCAGAGAGGTTGGAGGGCAAACCAT
TGTTGTAGAGGTCATTCACTAGCTCCGAGAACTGGGCAAACATGAGCTTGCCGATCGCAG
CAATGGCAAGTCTGGTGTTGTCCATGGACACACCGATGGGCGTGCCCTGGAAGTTGCCGC
CATGGATTGCCTTTCCACGAGATACGTCAATGAGTGGGTTGTCATTGACAGAGTTGATCT
CCCTCTCGATGGACTTTGTCGCTGCACGGATGACCTCAATTTGGGGTCCGAGCCATTGCG
GGGACGTGCGAAGAGCATATCTGTCTTGCTTCGGCTTCATCAATGGGTCGAGCTCACCAA
GTTTCTTTGCGAGCATCATGTAGGAGCTGCCCTCTAGGATGTGCTCCATGATGGCCGCAG
CCTCGATCTGTCCGGGGTGGTGCTTCAACTTGTGTGTCAGGTGATCGGTGTACTCTGGCT
TGCCGTTCATCACTTCACAGAACACGGCCGACAAAACTTCAGCAAGGACACCAAGTATGT
TCGCTTCAAAGAGAACAATGGATGCGAGGCCAGAGCCCACAGCCGTGCCATTAACCATAG
CAAGGCCTTCCTTGGGCTGTAGCTCGAAGAAGCCGTGCTGGATGCCGGCAATCTTAAACG
CCTCCGCGGCATTAACCTTGGTGCCATCGGGAGCCACAGCTACGGCATTCGGACGGCCGG
TGACAAGTCCCGCGATGTAGGAGAGCGGGACGAGATCGCCGGACGCCGTGATGGTGCCCC
GAAGCGGCAGACACGGTGTAACATTGGCGTTGAGCAGCGTGGCGACGGTCTCAAGAATCT
CGAAGCGGATGCCGGAGTACCCTTGGAGCAGGGTGTTGACGCGGACAAGCATCGCCGCGC
GCGTGGTGGCCGCTGGCAGCACATGACCGTCGCTGCCGGTGCCGAACGCCCCGGCGTTAA
GGAACCTGATGAGCTCCCTCTGCAGAGCGCCGCCCTCCTTGGTCCTCCGATGGGAGGTGG
CGCCGAAGCCGGTGGTGACGCCGTAGCTGTCGGTGCCGTTGGCCATGCTGGTCATCACCC
AGTCGCTGCTCTCCTTGACACGGCCGCGGGCGGACTCGTCGAGCTCCACCCTGGCACCGC
CGGCCGTGGCCACCGCCGCGACCTGGGCGATGGTCAAGCTGGCACCCTCCATAACCACTA
CCGGCCTGCGGTACTCCTCAACCATGCGCTTGACGGCGTCCAGATGGCTCCCCGACAGCT
CCTGCGCCGCCTTCCCCCAGTTGAGCGGGTCAGCACTCCGCGGCTTGGCCACGCAGACAC
CATCGCTGCCGTTGGCGGCCATTGGTTTGATCAACACTGTATCTTGAAGTCTCGATGGAA
CCAGGCAGTTGCGAGAGAGAAGGGATGGAGTAGAGACTGGTGCTCTTTACCGTGTCAGCT
GGATTTTTGATGTGGCGATTGACTGATGAAATTGTGGAGGAGCCGTGAGGGAGAGAAGAG
CTCGCTGGAGTAGGAGAGGTCGGGAGGCTCTTCTTGGATGGAAATGGAGGAGAGGGAGCT
ATTTAAATAGGTATTGCAAGCAGGGTGGGTGGGGAACGGAACTGGGGATTGGTGTGGACT
GTGACCGGGATGGTAGTGTTGACCGCCGGACCTGGCCGGGTGAGCACGAAGGTGGGGTTG
GTGACCTCGTGTGCGCGGAGTAGGCAGCTGCTGCGACGATGGGATACCAGTATTATATGC
AGTGCAAATGTGGTGTGCGAGGGAAACGCACGCGGTTGCTGGCTGATGCCCGATGGTGAT
GGTCTTCGTCTGCCATTTTCAGGTCGGCGGCCTTCTTTTGAATTTTGATCAAGTCTGGTT
TGGAGATGAGCTCCCATTATTGTTCCAGTCAGTTTTTGATTTATTTCAGTTAAGGGGTGT
ATCCAAGACTCATTTTTTATGATTTGGTGGGACGTGTTCTTTACAAATGCATGACACATA
CTGTAGGGAAGCTCTCGGACTTACAACATGGCTTTTGACCGTGGCTTCAAGACGGAATTT
TTTTTTAAAAAGAAAATAGCAAGACGGCAAGTTTACACTAGAGATTTAGACGAGTTTTGC
TTTTTCACGATTTCATTGACATAAATGTACCATCAAAAGCATGATGAATTATACTTAATT
TCTGCATATGTAAAATGCACGCATCCAAAACACAGTTCCTATCTAAAAAAGAAAAAAACA
ACATATCGACAATTGTAAAGTCCTAAAGACCGACACTATACCTATGTCGAAGGAGGTGGC
GGGCAATTCAAAGATTATGTTGTCATCTATGTTGGATAAAAATCTTTCTGACCATACACT
CCAACCACATACGCAACACCTTGAACAGATGCTGGTATTCCGTTCGATGTAGCGTAGTCC
ATTATTGTTCCAGTCAGTTTTTGATTTATTTCAGTTATAATGGGTGTGTCCAAGACTCAT
TCTTGTATGATTTGATGGGACGTGTTCAATACAAATGCATGGCACGTACTGTAGGGAAGC
TCTCGAACTTACAACATGACTTTTGACCGTGGCTTTAAGACGGAATTTAAAAAAAAGAAA
GAAAAATAGCAAGACGGCAAGTTCACACTGGAGATTTAGACGAGTTTTGCTTTTTCATGG
TTTCATTGACATAAATCTACCATCAAAAGCATGATGAATAATACTTAATTTCTGCATATG
TAAAATGCACGCACCCAAAACACAGTTCCTATCGTAAAAAACGAAAAAGCAACATATCGG
CAATTGTAAAGTCCTAAAGACCGACACTATACCTATGTCGAAGGAGGTGGCGGGCAATTC
AAAGATTATGTTGTCATCTA