| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_102325
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_328 |
1 |
562 bp |
AK371135 |
Not available |
Available |
None |
CDS Structure of MLOC_328
Contig Sequence (5153 bp)
>contig_102325 5153 assembly3_WGSMorex_rbca.fasta
AAGATTCTCTCACCCCTCTCTCGTTGCTNNNNNNNNCATAGGAAGATCTGAACATGCGTA
TGATTTTTTTTTAATTTATGCTACGTTACCCAACACTTAGGACATAAGGGCCCATGTCCG
TTCAGTTCGCCTAGGGCCTCCCGAAATACACGGCTGGCCCTGGTCAATGATTTTTTCTCC
ATCACTTGCAGACATGTATCCTTCTTCTGTGAGGAGGACTCTCCTCTCATTAGGACACTC
AAACTTCTTATGCCCCTTGCCACCACACTTGAAGCACACAATATGACTAGTATTCGAATT
AGAAGCACGAGATGATTCAAGCTTGGACTGAGATACTTCCTTGGTAGCCGGCTTAGAATC
TGATTTGAAACCACCGTTACCACCACCTTCTCGCTGAAAATTACGCCGCACTGAATTTAC
TAAATTACCATGACTTCTGCGACGCTTTACGTGCTGCTCTGCCCGAATGGCATGGTGTAA
CAACCCCCGTAACCCATTATATTCTACCATATCGACACGATCTTGTATCTCCGATTTTAG
ACCATGCATGAACCGTGCCATTGTAGCCTCTGCTTGCTCCTCTACCCATGTACGAACCAA
CAATATTTCCATCTCTTTATAATATTCCTCAACACTAGAGTTACCTTGTCGAAGTTGCTC
CAAGTGTGTGTACAAGGTCCTAGTGAAGTGCTCTAGAACAAAGCGTCTCTTCATGATATT
CTTCATTTGATTCCAAGACTCCGGATGTCCTCCCGCACGACATAGTTGGTTCCACCATAT
TAAAGCATAACACGTGAACTCAATAGATGCAACACGAACCTTTTTCTCCTTGGTGTACCT
CTGCCCATCAAAAAATTGATCCACGTGCATCTCCCACTCCAAATAATCATCCGGGTTATC
TTTTCCACTAAATGGCGGTATAGAATTTTTTATCCTGCCAATACTGTCATCCTCATAAGC
ACGATGCACACGTTCATGGCCTCCCACGTGGCGCACGCCACCTCCACGATGATTATAAGA
ACGACGTACATGCTCATAATAGCTACGAGCCCCCTCGGACTAATGATCTTGATGCTCACC
ATGGTTTCGAACATGTTCATTTACCCGCTGTTCGGCTAATTGCCGATTACGTCTAGGCGC
AACAGACCCATCACTAGGTGGTGATCGTGGTCTCAGACGATGAACGGCCTCACTGAAATC
AGCTATATTTTTCCAAGACTTTCCTCGACCTTGTCGATGCGCCTCCTAACTCGATTCGAC
ACATAGTCACGAGTTGCCTCCAATCCTAGCACGATAGCCGGGGCAACACTCGGATCATAG
GTGGGCAAGGGCATCTCTTCCTCTACATCACCTTCATGTGCAGCGTGCACACTTCAATTT
GAGTTCTGTGAATTCACCATGGTAGAAACTCAAATAGATCAACTTCAAAAACTAGAGAGA
AAAATTGTATCGTGATCAACCTTGCTCTGATACCACTTGATGAGACCCGAGTAGATGGCG
AGTCGATCGAAGGCCCAATCTTTCACGGTATTCACGAAATTGCAAGAGCATTGACGAACG
ATCGTCGCAAAAATAATGTACGTAGAAGTAGTAGAACGGCTCTTTGGATCAAGCAAAGAT
GCAAGAAGACCAAAGAACATAATAACCTGCGCAAGAATTCGATCGGATCAAATCCTACGC
GTAGCAACTCTAAAATCCCTCATGGATCAGCAAACACAAGAATATTTGATGCATCCCGAC
ATGATGCGTTTTTTGGTATTTTATGCAACTCCCAACTAAAACAAAAAGTCCCCCTTTACA
TCGGTCGTAGCCAGCCTTTTATATGGGCTTCACACGGTCAAACCGACCAACAAGAAATAG
CTAAAACGACTCGGACTCTATCTCAACCAAAATACGTAGGAAACTCTCTCTCCTAAATAA
TACCTTCCTAATACAATAATCCGACTTACTCATCATGATACATTCTAACCCAACTTAACT
AGGAATCCTACCAAACAAACTTCTATTTAAAAATGGAACTCCTGCCAAGTTACAACTACA
TGGTGGCGTTCTGAAGTTTGGCGTGATGTCTTCTTTCAATGGTTCAGCCGACGGAATTTG
AATACTAACAGAGCCTATATAAAGTATACATGACGTCTGTGTATTTGTGTGAGTTGGCGC
CTTCAATTCCTTTGCACTCATACTATCGTGTCCCACCATATCTTGAATAAGTGGCGCAAT
GCTGGACATCACCATGGTGTTTGTCTCTTTTCTAGTAACTACAGCATCAGTGACCACATC
ACTCAAGCTGAGAACAAACAGATCGTTCAAGAAACAGTGAAAACAATAGCTGCAGAGAAC
AAGGCAAAGCAAGAAGCAAAGAGGAAAGCTGCTGCTAAGAAGAAGAAGGAAGAAAAGAGA
GCTCACAGGGAAGCGGCTTCTCAGAAGAAGGAGGAAGAGAAGAGAATTGCTGCAACAAAA
AGAGAAGATGAAAAGAAACAAGCTGCTGCAAGAAAAGAAGAGGAAAAGAAGCTACTTGTT
GCAAGGAAAGAAGAGGAGAAAAAGCTTGTTGCTGCAAAAAAAGAAGCAAAGAAGAAACTT
GTTGCTGCACAACAGATGATGAAAGCTGCTACAAAGAGAGCAAAGGAGCTAAGCAGGGAG
AATCAAGGAGCAAAAAGGAAATCAAGCTAGTTTGAGAATCAAGGAGATTGTCCAAAAAAG
GCTGCAAAAACATCAATGTTTGATATCTTCAAGTAGTTGCCATGATCATGCTATCTGTTG
TGCTGCAATGATCATGTATGGTACCATGTTACTCTTTTTGCTAAAAACTCTATTGGCGGA
TGGTTTCAAATACAATGGTCATGTACTTTGAAGATCATGTGTTGGATTCTTCTTATGATG
CAATGTTTTATTTTAGTCAGTACTGGAATGCCAAAGTAAATATAAGAAATGCAGATTGAT
AAACAGTCTCATTGATAAACCATAGCTTCCAAGGTTCAACATAGCATTGCCACTACATCA
TTGAAAATATTACAAGTGCTACTAAAACCACATTTAACCAAACTCACTACAAGTACTACT
AACACCACAAGGACTGACTGGCATTTCCCAAAAGAGTACTTCATCATCTTCACTCCTTCA
TCATCAACAACAGCAGTTCTTCACCATCAACAACAACTTCACGTCTTGAACATGATCAAC
ACCAATGCAACACAACCTAGCAGCACCACAACACGGGTCACCAGCTCTCTCCCAAGGGTC
ATGAGTGCAGCAGCTTGCTGCCTTGTCAGTCCATTTGCACTCTCATTTTTCAGAGTCTTC
CTCTAGATGGTTGAGCCCTTCATGTAGGTAAGCTCTTGTGCTTTGAGCAGTTCCTCCCTT
CGTTCCTCCACTGCTCCAATAGCATCTACAACAGCATCGCCGACGAGATAGTGCTTGTCA
ATGAGGTACTGGACGTACTCCAATTCCGAGTGCCAGAAATCGCAATTCACCTAGCCAGAC
AAAACCAGTGCAAATGCCAAGGTCAAAAAACTCCAATCTTTAGATCCAAAACCCAAGAAC
CAATCATGAAAAGGAAATATATCAAAGAGAACCACTAACCCCATTCTTCTCGCATTTGTA
GAAGACCCACCTGTCGTGCTTCTCACTGGTGGATATGTACATGCGCACCTTCTCCTTGCA
ATAAGGGCAGCGGACCAGAGGAAGCGCCAGCGCCCGGCGGTGGACAACAGAGGAGGAGGA
GCTTGCCGCAGCCATTACCACCAGAGGGGGAGGAACTGCCGGCGACGGTGGATCTCCAGT
GGATTCGACGGCGGCGACGGTGGTGGGGGAGCAGAGCGAGGTGATGGGGAAGCAGAGCAG
AGCGAGGTGATGGGGAAGCAGAGCGGAGCGAGGGAGTGGATAGAACGGAGCGATGCGGTG
AGGGTTAGAGATTTTAGGGAATTGGGGATTTTTGCTCTTTTACAGAAAACGCCTTCATGC
AAAATTTGCCAAATCAGAGAGCACAACATGACGGTCAACAGGTGGTTAAACTAGAGCTCT
ACCGGCCGCATACGTGCTACAGTGACTGTATTTTCACGTCAAATCATCTTCAGTGACCGT
AACGAACGTATTTCAAAATTGAATGATCATATCGTGCTTTCGTGACAACTTGAATGACCG
TGGGTGTATTTAACTCCGGATTTTTTTTATAAATTATCAGTCGGCCATGCGTGGCGTTAT
TTTTTTCTCTTTCATGAAATGAGCCGATGGTCGTTTTTTTACCATGCATGAGAGTGGGGA
TGGTTCCATCATCTTTCCGAAACACGGGACTGTCCATCGTCGTCGCTGTCCGAAATCACA
TGATGCAGTTTGACCCCGTCCCGTCACCTGCAAGGCTCGCACTTCTCGGCACGACTCCCC
CACTTTTACGCACGAGCAATGACGGCGGTGGTAAAAAAAAAACAGTTCGTAAATATCTGT
ATATACGTTTCAAAGTAGTCATAGAGAGAGAGAGACACACACACTGCGGATTGTGCTGGC
GCTACCGTCCGTTTCTCCACATGGGAAGGATGGGCAAACGGCCAAAAGCCTCACGCGTCT
GTCCCCGGCTAGCTTGGGCAAGGCGACGCCGCCGCTTTGAACGTCACGGGCGCCAGCCAG
CCAGCCACCGGGAGCGGAAGGGAACTCAACTCTCTGCCGCGACGAGACATTCATTCCTCC
CCCCTTCCCCGCGCCCGCAGTCTTCTCGTCTCATCTCGCGGGAGAGAGAGAAAGGAAAAG
AAAAAGGGAAAGGGAAACAGGCCCTCGAGACAGACCAAACGCAACAGGTTAAAAAATAGT
TGCGCTCAGTTTCCTCGCTCCCACCCCCCGCCGTCCGCCCCATTTCCGCGTCTCGGCGTG
CGGAAGTCAACCCCAACACACCCCGCGCCCCGGAATCGCCGCGAATCCGGCGGCCATGTA
CGGCGACTCCGACGGATCCAAGGACCCCGGCGCCGCGCCGCCGCCCTCCGACCAGCCCTT
CCCCAACCGCGAGCTCACCCTCAGCAGCTACCTCTGCGACAAGCCCACACTCGCGTCCGC
CCCCCCCCCCCCCGCCCCCGCCTCCCGCGCCCCGCCCCCCGCGCCCTCTGGGCCCCGCTG
CCCATGCACCACATGCAACCTCCCCACCTGCATGTCCGCGTCCCCTGCCTCCC
