| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location | No map location |
Predicted Genes from contig_102282
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_322 |
1 |
477 bp |
MLOC_322.1 |
Available |
Available |
LOC_Os01g04050.1, FRAME:+1, EVALUE:9e-12, 13101.m00359 protein BBTI12 - Bowman-Birk type bran trypsin inhibitor precursor, expressed |
CDS Structure of MLOC_322
Contig Sequence (5511 bp)
>contig_102282 5511 assembly3_WGSMorex_rbca.fasta
CCAGGAAAAGAGAGAGATCCAAAGTAACCAAATGATTAAAAAAGAGCATTTATTGTCAAT
CTAACCCTCCCACCCAAACACCTTTAGAGTTAGAGTTAGTTCAGGTTAGTTCAAGGGTTA
GAATCTAACTCTAACTCTAACCCCGTTAGAGTATCCAAACATGGCCAACAAATGGAACCT
ACACGAAGATTGGAATCTGCTACAGCATATCCACTATCTAGAGCAAAGAAAGCATTGGAA
TCCCATACATCCCCGTGAAGAACCCCCAAACTACGCATCAAATTGCCCAAAACGATTCCT
TCCAGAATCGTTCCACAAACCGCCGAGCAATATATGCGCGACGAACCACGACACTTAATA
AGCAAACACTCGATCTTTAACCATGGCGCATCATCTGACCTATTTTGATGTATTCGCGAA
GCCCCCAACTCGTCATCCTCTGTGCCGCAGCCTTCTCCTTCTTCCTATCTTTATCCGAGT
CAACAACCTCCTTCCTTTGGACCACATTGTCGTCGCCGCTACATCAAGAAACCCCCAAAA
AATCCCCTCCGCTAAAGCCTCGATACAAAGGATTTGGTCAAGGAACCGAGAGCGCGGGGG
GCGCGGCCGACATCGGCAACGTCTCCGGTGCAGCCGCCCTCACTCCCTCTCTCCCACTCC
CTCCAGTTGTACTCGAGCCGGCGACTTTGTCCGGCGTCGGCGGCGGAGTAAAAATGCAGC
GATCGACAAGGAAAAGGAAATGACTTACCGGAGAGAAGGAAGCCGTCGTGGTCGCCGGAG
GCACCATGTCGCCACTCGCTGTCATTGTCGGAGACAACGCGTCGCCGCCGCCACTGTTGC
CTCGTCAACCCTAGGTTTCGTGCGCTCATCTCGTGCGGATTTAGTTCCACGCCTCTGAGA
CGATTCTTCTGGACCCCGTGAAACGTAGCGGACCGACGTGGTTTGGGCCAGAATCTTCCC
TACCGTGGGCCAAACCAAACAACAAAATAAAACCCATGTGGAACAGTTCCCGACCTGAAA
CGACCCACGTGGATTGGGCCGAGATCCCACGCAAACCACGTGGTTTACCTGCTAACCAAA
CGAGGCCTAAGTGTGGGTGAAAGCACTTGGTCTTTTACTTTGGTCATCGATGGCGACGTG
GTGTCGTGCTCCTTCTTGAAGGCGTCGACCGAGATCTGCTAGGAGGTGGGAGAGTAGTGG
TGGATTGGTGGTGGCGCCGATGGCTTGCTCTTATCTCCGGCAACATGATATACCTTTGGT
GCTCCGTGTTCCCCTTTTGTCTTGCTCCATGTTTGCGCCTTTGATTGACGGCTCCCGCAC
GGCGTAGTGTCTTCCCGTTGCCGACGGCGGTGCTCGTGTGGTTGGTTAGTCGCTGCTTGT
GGGTTGTTTCCGATGTGTCTCCGTTTGAGAGCTCGTGCACCATGGTTCTAGGTTATGGAA
ACCAATCTGTCGGTCGCCTGTACGGCATCCATCGAGCATGGGTGAAGGGTTGTGGCCCTT
GGCGGTGGTGGAGACACACCATGTTTGGCCCTGGACTGGTCAATCGGTTGCAGTCACCAG
TTAGCGACACAATGCAAGCGTCGTGTGCCTCCTTCTCGTGGTCATATTGGTCTATGGATG
ATGGCTTTGCGGTGGATGTTGCCATCGGTGCTTAAAGCTCTCGTGTGGCTTGCGTCGTAG
ATGGGGTTGCGCCGCTGCTCTGGTGTCAGCTGTTGTCGCCGGTGCCTCACCTCTTTTGCA
TGCGCCCGTGCCGACCGCGGCACCGCTGGCACTGGGATCCTCTCTGGATCCAAATGCCAG
TCGTGCGGCAGTGTGACATCAGATAGGGGGTTCCCATTGCCACCTTGCCTGGTGCACTAG
TACGCTCACCCGCTGCCGAGGCGGACGAGAGGACGAAGCCGGGGACGGGAGCGTCGGGTA
CTTGCCCTTGTCTTTGCTGGAAAAAAACCCATGATGGTTAGGGTTTTGCCGCCGGTGAGG
GAGCAGCGGGTGGCTGGGTGTGGATGGGGGACGACTCTTGGAAGAGAATGAGGCCGCCCC
CGTACGTTCGGATTAAAAAAGGACGCCTATGGGTTGCTGACGCGTGATCCCACGATGGGT
GGTCGTCGTTAATAAAAACGACGCCGGCTTTGACCGGGCGTCACGTGTGGACGGGTACGA
ACATGGGAAGGCGTGCCGCGTCCGTGCCAACGCATTTGGAACGTAATTTTGGGTCAAAAT
GGATCCGCGCGGACGTATTTTGGATTTGTTTGAGTCGACGTGTTGGGCCTTTATTTTTGT
TCGCGCCAATTCATAGGGACACAGGTGGACGATTTGGGTCGCTGCGCTGGAGTTGCTCTA
AATTTGAAATTATATCATATAAACCACAGATAAATAAAGTAAATTTGATTCAAATATCAT
CTTAAAAATTCTAATACGTTCTTTACGGAGAATAGAGTGGGTATATTTTCTGTGGGCGCT
CAGAGTGCGTTGATGTGCTAAGCATGGAATTTGGCCTAACAAGTCAAAGCCGCCACAAGT
CCAAACCAGGAGGCAGACAACTTTATATCCGGCAACTCCCCAACCCATCCAGCCCATAGT
TAAATCGCGTTGAGATGGCGTACTGCATCTTTCGAACTCGACGCTTATATAGAGAGGTAG
AGTTGCTTGCAGCTCTGGCCAGAAACAAGATATATAGAACGACATACCAGGACCTTCGCT
CGAAGAGTTCATCAGCAGCCATGAAGGGCACCAAGCTGGCGGCGATCCTGATCCTCGAGG
CCGTCCTGGTCATGGGAATCCTCTCACACGTGAAAGGTAAGCTGCTGGTGTGTGCTGCCA
TTTTATGTGTTCCCAAATTTAGTCAGATTGCTTCTTGTGACTCAGACCAGTGATCATGGT
CTTATCTCACTACTCCATGACGTGAATCCATGCGTGCGTGCGTGCAGCCGAGGTGTCCTT
TCCCAAGTGCTGCAACAGCTGCAGGTCCTTCTCGGGGGCTGCCTTCTGTGACGACGTGCT
GCCCAAGTGCCCTCCCGACTGCGCGTGGTGTCGCGTGGTGCAGGTGCGCCCTGTAAAGAC
GTTCCGGTGCGCCGATGGGAAGACTGCCGACGGCTCCTGCCAGCCATGCAAGAAGCAATG
ATCTACTAATATTTTCTTCTTCGTCAAAATGTTGTCGTTGTCTGCCGATCGACAAAAGCT
TCCGTGAATAAACACATGTACTCCCACTGCTCAATCAAATAAAATTTGTTAAGGTATGAT
TCATATGTGAAAGGTTATTTTTATCGAAACGGGCGATAGTAACAAAAACGATACATCTAG
CCCAAAATTCCACAAAGACTCAAACAATCAAACGAGCCATCGCTTGATGGCACACCTGAA
CAAACCACCTTGTGGAACCTTAACAGGACTAGTCCCAAAATAACAATAATCGGATAGGAA
AACACGTGCCGGCAAGTAACATATTTTAGGGTCGCCCCAGCACGGCAATAACCAGTTGTT
GACTTCTTGATCTTGTTCATATTGACCAGTTGATTCAAACCGTGGGTGATTGAGAAGTCA
TTGCTACGTGAACTTTGAGCAGCTTAGGGCATGTTTGGTTGCTAGGCTCGTACCTAGCCC
GCTCCAACATGCAAACTCCAGTCTGTTTGACACCCTGAATGGCCTTGTCATTAGTCCAAC
GGGTGCAAAAAGAGGCATCTCAGGCAGGCTGAGAGGAATGCAAGAAATGGGTGTTTCCAT
GATACAGCGCGCCTGCAACCGCGTCTCAACTTAAAACATCTACAGACGGATCCTTTAAAT
ATAACTCCTCAAATGTCAGTAAAGTTCATCCGCAAATTCATGTTACAAACTACTTAAGTA
TAATTAAAATATAAATAGAACGAGAAAAGGCGGAGGAAATCATCATTTCCTCGTCGCCCC
CTTCCCCTTTCGATCGTCCACGTCGTTGTGCCCCTCCTCCGTGTAGGTGTCGGCGTGCGG
TGAAGCGTCGTCGTCGTCGTCATCGGAGCCGGGCGTGGTGGAGGCGTCGATGTCGTCCTC
ATCGAAGCTGCACCGCATGTCGAACAGCCCACGAAACAGGCGGTCCTGCTCCTTCGCATG
GCGGGCTGCTTCCGTCTTCGCCGCCGCCTCTTTCGCTCCCTCGCGCTCCGATAACTAGGG
TTTTCCCGATTCGGGTATTTAGTGGGGTCGGTGGTGGGTCGGGCTTATGTGTCCATGGTG
GGTCGGGCTCACATGTCGGTGGGGTCGATGGTGGCCCAGGCAGTCGGGCGGGCGTGCTTG
GACGTGTCTGGGCTCCCTTCTATCCGTCCCATATTTAGGCTGAATATGAGGGGTGTCAGT
CAGTCCCGACATTTGAGGTCCGTTTAGAGAGTTCGTCTCGGTCGATTTTTCGTGAACAGA
CAGCCTGCCCCAGAATTTTTTTTAGATGAACGAGGAAGCTCTCCCCGGCTTCATATTGAT
ATGAAACCAAACGGTTCAAACATTTATTACATCGGCTCGCTAAGAGGAGCGGTTCAAATA
TAAAACTCAAAAACGACACGAACTAGGCTTTAGGACTGTGGTAGAGCCGAAAGGCTGGCT
CGCAGGCCGCCCAAAGCAAAACATGGTAGTTCTTGGTGTAGTTTCCGCATCTCCCAGGTT
TTTCAGATCAAGATCTTGGAGATTTTCCTGCATTTCATCGGTGGAGCTGTGGTTTCCTGT
GGAGACCAGCACGCTCGAGGGTTGATACTGGATTCAGAGTTGCAACCTTGCCTTTTGGGG
CCTCTTCTTGATTTGCGATTGGAAACTGTCCAAGTCTAGAGATCTTGAGATTCTTCCATC
GATCAGTCACTTTATCTTGAGTGTGGTATTTGGAGATATTTCCTAGAATTACTTCAAAAG
TGCCACCACAACCGCCGCATCTCTCTTTCTCTCCTCTCTCTCACGCTAATTTCGGATCAA
TCACACAACCAATCCTCGCCGCCGTCGTTGGGAGCTTCCTCTTGAAGCACCGATCTGAGC
TCCCTCGTTCAAAACTGGTCAGAGCTCCCTCGTTTGTCACAACCCCGCCATCCGAGCCCC
TCTCTTGCCACCGGTCCGAGCTCCATCTTCCGCTGCGACCCCGCCATAGGGCGTCCGTGC
TCCTCCACCCATCGTTGCTGGAACGGGCGAATAGCTCTCATGCGACGTCGTTGAGTTGTG
TTATCTGTCATGCGACGTTGTTGGTTGTAATGACTCTCATGCGACATCTCCCAGCGCATA
AATAGTTGTCGTGCGACACTGCTGCCTAATCCGAAGACACATGTTTAAAACTCGAACCAG
GTGAGCCCCTACGTAACAAAGCGGGACCCACAACGTGGGACTCAGTAGCTTATCCAGCTC
AACATTGGTACAAGAGCACTACCGCGACCTTCCCATCCTCGCCCCGCTCCCCGACNNNNG
TTGTTCTTCTTCTCCGGCGACGACGGGCAACAACGTCGTTCGGGGCCGCGACCTAGCAAT
GTCGACCTTCGCTTCAGCCTCCCGTCGCTCATGGTCGTGCTATGGCGAAGT
