morexGenes - Barley RNA-seq Database

Contig contig_101937
Source Contig contig_101937
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_101937 (8065 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_101937

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_284	3	2711 bp	MLOC_284.1	Available	Available	LOC_Os07g39350.1, FRAME:+3, EVALUE:0.0, 13107.m04076 protein transporter family protein, putative, expressed
CDS Structure of MLOC_284

Contig Sequence (8065 bp)

>contig_101937 8065 assembly3_WGSMorex_rbca.fasta
CAGTTGATGATAAAAAATGTCATGGGTTGGTTCCGTCCCGGTGTTTAGTTGGAGAGATGA
AATGAGAAGAATCTGAGGCTACTCACCTCTTCGATATGAATGATGAGATTACATATCTAA
ACAAATAGAGTTATTTGCATTTGACAAGCCTATAATTTAAATTTTTAACAACATTTTCTT
TCTATTTTCAACACATGCAAATAAAAATACATGATCCTCAGTACATACCAAATATTTACG
AAAAATAATCACGAAAATGAAAAATAACCACGAAAAAAATAATCATGAAAACGAGAAAAA
ATAACCACGAAAACTTTTGTTCGGGTGCGGGGGTGAGCGCGGTGAGAATTGCTTGGTTTA
TTTCTTTTTTTCTTTGCTTTCTCAGACGAATAACGAGTCGATTCCTCAAAATCATCTGAA
GGGAATATTCCCTGCATGCGGATGATCCAATTCCGATTCCTAACCCAACTAAACAGGTTG
TTAGGGATGGAACCAATCTGTTCGATTCCACCTCATCCTAAAACCAAACACATCTCAGAG
GATCCGGCTCCGTAACTTAACTGGGCAAGCGGCTTGTTTGACCCATCACCCATGGCGGGT
GCACCCATACTATAAGAGCATAATAATCGGTGTCTATATAAGCGGTCCATATAATACTGC
GCGACACAACACGGCAGTTCACTCATCACTAGGCTGTCAGGGTGTTCATCGTTCGATCAG
TTCGTCCTAATAAGCGGATGAAAAAGAGAAGGAGCAGAGGACAAGGAAGAAGGATCGAGG
ATGGCTTCAGCTGCGCTTCCCCAGGCCGTCCAGCCAAGGAAAAAAAGCAATTTTAAGTAC
GCCTTCACCTGCGCCCTCTGCGCTTCCATGGCCACCATCGTCCTCGGCTACGGTACACAC
ATACTCCTATGTTTCCTTCCCGTATGTCAGATAGATCGAGTACGCATCTTCTTCTTCCAT
GGCTATGCATAATTCTCTTCCGACCGCCCAGACGTCGGGGTGATGAGCGGGGCGTCGCTG
TACATCAAGAGGGACCTGCAGATCACGGACGTGCAGCTGGAGATCATGATGGGCATCCTG
AGCGTGTACGCGCTCATAGGGTCCTTCCTCGGCGCGAGGACGTCCGACTGGGTCGGCCGC
CGCGTCACCGTCGTGTTCGCGGCCGCCATCTTCTTCACCGGCTCCTTGCTCATGGGCTTC
GCGGTCAACTACGCCATGCTCATGGTCGGCCGCTTCGTCACCGGCATCGGCGTGGGCTAC
GCCATCATGGTGGCGCCCGTGTACACGGCCGAGGTGTCCCCGGCGTCGGCCCGCGGGTTC
CTCACGTCTTTCACCGAGGTGTTCATCAATGTGGGCATCCTCCTTGGCTACGTGTCCAAC
TACGCGTTCGCGCGCCTCCCGCTCCACCTCAGCTGGCGCGTCATGCTCGGCATCGGCGCC
GTCCCGTCTGCACTGCTCGCGCTCATGGTCTTCGGCATGCCGGAGTCGCCCCGCTGGCTC
GTCATGAAAGGCCGCCTAGCGGACGCCAGGGCCGTGCTGGACAAGACCTCCGACACGCCG
GAGGAGGCTGTGGAGCGCCTTGACCAAATCAAGGCTGCCGCCGGCATCCCCAAGGACCTT
GACGGCGACGTGGTCACCATGCCCAAGAGAAAAGGCGGCGAGGAGAAGCAGGTGTGGAAG
GAGCTTATCTTTTCACCGAACCCAGCCATGCGGCGCATACTTCTCGCGGCGCTCGGCATC
CATTTCTTCCAGCAGGCGACGGGCTCCGACTCGGTGGTGCTCTACAGCCCACGCGTGTTC
AAGAGCGCCGGCATCACCGGCGACAACCGCCTGCTCGGCGCCACATGCGCCATGGGGGTC
ATGAAGACGCTCTTCATCCTGGTCGCTACGTTCCAGCTCGACCGCATCGGCCGGCGGCCG
CTGCTGCTCACCAGCACAGCCGGCATGCTCGCCTGTCTCATCGGCCTCGGGACAGGCCTC
ACCGTCGTGGATCGGCACCCGGACACCAAGATCCCGTGGGCCATCGCCTTGTGCATTGTG
TCCGTCTTGGCCTACGTGTCCTTCTTCTCCACCGGCCTCGGCCCCCTGACGAGCGTGTAC
ACCTCGGAGGTCTTCCCGCTGCGGGTGCGCGCGCTGGGCTTCGCGCTCGGCGCGTCATGC
AACCGCGTGACCAGCGCGGCGGTCTCCATGTCCTTCCTGTCCTTGTCCAAGGCCATCACC
ATCGGCGGCAGCTTCTTCCTGTACGCCGGCATCGCGGCGCTCGGATGGATTTTCTTCTTC
ACCTTCATTCCGGAGACGCGTGGCCTGCCGCTGGAGGAGATCGGGAAGCTTTTCGGCATG
AAGGACAGGGTCGTCGAAGAAGACACCGCCACGAAAGACAAGGTGAAAGTAGTGGAGATG
AAGGAAAACGCTTCTCATCTGTAGTCTGAAGGTGCGCTCATGCCAGGCTACTCGAAGCCC
GTCGATACGATTGAAAAATTGAAGCTCCAAATTTCATCTCGTATTAATAATAATAAAAAA
ACTGATTCCTTCATATCCTCACGCGCAATCCCCTCCCCCAATCTCTCGCCATCGAATCGG
CCATTAATCGTTGGCTCTGCTGAGCTCTGCTTCCCACCTCTCTCGCCTCGCCGCCAGCTC
GCGCTCACCAGATCCAGTGCGCCGCCATCGTCTAATCGAAACTCCACCAGCCAACGACGA
CAATTCCACCTCACCAGCCAGCTTCATCCGACTCGCACCTCCAACTCAATCCCCCTCGCA
TGGTGGACCGCACCACCCACCTTCGTCCTTCGCTCCTCCCCGCAGAGCAGCACGGCTACG
CCCCAGTCCACTCCACCAATGTTGTCCCCGTGCGATTCTGTGGTGTTTTCTCAGTCGCTA
GGCTCCCCCATCTATTGAATCAGATGCATCCCCATCGATTGATTCGGCCGGCTGGAGAAC
ATTATTTCTGGATTGCATAATTGCGCCCCTATTTGAAGGAAGGCATCTCCAAAGCAAAAG
GTATGCACACTTCATGGACTGCCCCACATTTGGAGATTTGCAATTTTAGCAACGGATTGT
GTGTGTGTGTGTGTGTGTGTCTTTTCGCCAAAAAAAAAGATTGTTGTTGTGTAATTCATG
TGTTTTTATTTCATGTTTGTGTAGATTTTAGTTGATGGAAGCTCATAAAAACTCCGATTA
GGGTAGATGAGACCCGCTTGTAGATAATAAATTTCGGCACCCGGTTGTTAGGGGCAAGCA
GGCTATTTTGCAATCTCAAATTTATGTGTTTCCAATGTATCTTCCTTATGCACCGATTTC
AGAGAATTAGTGCTTCCTATGTACAGAAGGAATTTTTCCATACCGCTTCTTATATATATA
CTGATGCATCTTAGCATCTACCATGATTTGTATGTATGGACTGCATTTCAATCTTGCTAT
ACTTCTTAGGTGTAAAAATTATTTATTCATAGAATTAACAAAAATGCTCCATAGGTGATT
CATACGTACATAAACTTCTTTCATGCTATGGAACTTCAGGCTTTTGCCATGTTTCTAGCT
GTATAGATGTGAAGTTCATTGCCTTAGAGCATCCTTGCTTTTTACGGGTACATAATTACA
TATAGAACAACAATCTTGCTTCTTGATTGGTATATATGTTCGGATTGTGTGAAAATTTTC
ATTTTTTGAAAACAAATAAGCTTCATTACATTTCTCATCACATGTATGGTTTCTTTTTTT
TCCATGGCCACTTCAGGTTATGTAATTAGCCTTTTCATTCTAGTAACAATGCGTATATAT
TCCACTGTTAATACAACAGTATGTCGTGCTTGCATATTTATATTTCATTCTATATATCCC
CTCGCTCTCTCGTCGTTTGTAAGTCTATGCTTTCATGCATACAAAATTAAGAGGATGGAA
TTGACAGGCCATTTGCTAGCATATGCAACTGTATGTCTGTGCTTCCATCTTACAGTAATT
GTTATTGCTTCAAAATGCTAAATTCTATGTTTTGTCCATACATGTGTTCTTCCACACTTT
TTCACCATACATACCTTACTTACGTGCTTCCACTCATACTTTTCATTGCTTCAAAGAATT
ATGTTTTGCTTCAAGCAATTTCGTTTGCGTTTTGGATAGCATTGGAAGAACTATCTGAAG
CACCGTTGCGCTGACATGTTACTTTTTGAAGCCAACAGAAACAAAGCGATGTGTTGCTGC
TATCCATCACTGGTGCCAAGATAATGCTTACAGGAGCAAGTAGGAGGCACCAAAGGACAA
CTTGATTGGCCGCGTTGTCACATCCCATACAAAAGCAAGTAGGATGCTTCGATTCAAATT
GATTGTCTGAAATCAGAATTATTTGTCCAATAAATTATGAAAGCATAATCTTTTGTCTAT
GGAAACAAACTGGGCATATTTGTATTTCTTGAAAGGAAACACATCTCTAATGTGTTTAAA
GCATGTGTACTCGTGACAATGTGTTCTTTTCCGTGGAAATTTTTTATTTTGTTAGAAGCA
ATTGTTTAGTCGATCGAAACAATATTTTCATGTTTCCCAAATACCTTACTTCGTATCCAA
CATTTGTGGTTCAATGCCTTACTTTGTATCCAACATTGTTTTCTATTGCTTCCGGTGCAC
AAAATGAAGCTTAGTCACACAATAACCAAATTTGCGTTTTCTCAAAACATGTGTGCATGC
TTCCTACATGCTGGAGCAAAGTTTACGTCAGTCACTAATCATGCTTTTAAAATTAGCGCA
CTATGTTTTCAAGCTACGCATCTGAATATATTCATGTGTTTTAGATCGAAGCAAACTTAG
TTATGTCAGAAGCAAAACCGAGTCACTTTGAAAGCAGGTTAGACACTCAATTATGGGAAC
CCACGTCAGTTTCCTGGGTAAAAGCGTGCTATTTTTTCTCGATCTGGGTTTGACCCTGCA
ATACACGCACTTATTTGGAGGAGGGCAGACGGACAAAGATAACTGGGGCGTGAAATTTGA
AAGCAGTTACGGGCAACCACCCAATTAATAAGAAAGCAAAGGAGCAAACCACGCGCGGGG
GCCTCTCACTAGCTACTAGATCGGACGACCTTCATTAGCCTGATCGGACGACCAATGACT
AGTCTGATAAGAAGCAATCTTTTTGTAGTCTAATGCCTAGTAGTGTCAGAGATGAACTAG
TAAGCCAAAAGTCACCCAACTGTTGCTGATGTACCATAGAGATGTAACTGATGAACGTGG
TGATTCTCCTAGACGTGAACTCATGGTGCTCAATGATGGATTGTTTGGATAGTACGCCTA
GACGTGAACTCATGGTGCTCAATGATGGATTGTTTGGATCAAATTTTAATAGAACCGTTT
CCAGTTTGGATCAATCTGATACACCCTAGAACACCCCTTGCCCCATTGATGCTGCTCGGC
GTATCAATATCATCTAGTTTATATAGATACTGTTAGGACAAGTTTCCAAATAATATAATT
ATCGAAAATCAGTCATGAGTGTCATTCCAGCGTAGAAATTAATTTACACTGATAGATCAA
TCTTGATAAAAGAAACTAGTACTACTTAATACAGTATTATACAAGGTTGAGCGGAGGCCG
TTCAACAGTTTATTACAAACACGCCCATATTTAGCATAAAGACGAATATAACGCAATGGT
CATGGGGTAGCACTACTACTCGTATATATAGGTGGATGTGTCACAATGGAGTGAAGTGAC
ACGACTCAAACTACTACAACCTGTCAAGCGTCAGAGTGAGGCTCGACAATTTATTCATGA
TGACGGAAACGGTGAAATAATACAATGGTGAACTCCAAGATTACAAGACTGACTAGGATT
CCTCTAGGCATCAAACTCGCTATCATACTCTTCATCCATCAGATCTTCTTCATCAATATC
TGACCAAAACAATAAACCAATGAGTACTTTAAAAGTACTCGCAAGATAATTCGGACATAA
GATAAAATGAATACAAACACAATGCATATGCACAGGTTAATTTAATTGTCACAATCAGTA
AGGTTAATAAATTAGCAGTAAATTGAAGTAAAATAATGGTAGATAAATCGGGCAGTAGTC
CTCCCCAAATATCCAAGAAATTAAAATACACCGACCGGGTGTGTGAAGCGACGTCTTGTA
AGGTTAATAATAAAAATAAACTACCACAGTCGTTTAAGAGACACCACGAAAATGGCTAAA
TGAAATAAATAACTTACCACAGTCCAGCGTCTAGGTGACACCACGTAAAAGGCTTAATAA
AATGAATAACTACACTCAGACACGCATCTAAGTGACACCACAGAAAACGCATAATAAAAT
AAATAACTGGCCACAATCGAGTTTTTTAGCGACACCACGGAAGGGGCATAATAAAATAAA
TAACTGACCATAGTCGGGTGTCTCAGCGACACCACAGAAAGGACATAATAAAATAAATGA
AAGCAAGTGAATATCCGAGTGGTACAACCAGCCTAACAGTCATATAACCAAAAGTAAGAG
TATTCATAGTAACAATTTGTTCTCTAGAGACCCACCTGAAGACCGACACTTGACCTCTCA
ACCAGTCGTCCTTGACCGTGGACGCAACTACTCAAATAGTTTTGACTCTCTAGAGGGTGT
ACTCTTTACCCAGAGCCAACACGTTTCGATACACAAGGACTAATCCCATGTATGGTATTT
TAGAAGTAAACACACAAAACCAACACACATCCATTCTTACACAACGAGGTACGGAATCAC
CCAGACTGCGCTTCCAGGGAAAACTATAAGACGGGAAGGCCAACATCCTCAAGTAGCATG
GGTTCAAATTTATACCACACGCTACTAAGAGGTGCCCCCCCTCTAGGCCCCAGGCCGGAA
ACACCCATGCCCCCTGACCAGATGACTGACATTATTCCAGGGCCATGGAACCTTCATCTG
ACCCCTCTACTTCATGTGCACATGGAAATAGGATTACGACCTACTAAACTGCATTCCCTT
TTGGAAAGGCCTATTGCAGCCCAAAAAGTAAGGTGACACACTAACAAGACTCGATCTATG
CCGATACTGGAGGTGTTAATTTGTTCACATACCGTCATGCAGCTGGCATGACCAGGATAC
AAACTATCACGTCCCAAGTGACCAGGCTATCCAAAGGCCTCTCATCACTTCACAAGTGTT
AACTTAACCATGCATAAAATCGTACCACATGCCATGCTATAAAGTTCATATGCAGCAAGT
TTATCAAGCAATCATGTCACCAAACATCACATCAAATGTTCAAACATGCTTGCCTCGGTC
GACAAAGTCAGAGTCTAGCTCGGCGAAGATGACGGCATTGTTTCCTCCTTCGGTATCTAC
GTTAGACAAAAATTGAATTATAACGTAAATACCGAGTGCGTATAAAAGTTGTCCCAAAAT
ATTTTTAAATAAATACCACAGAAAACTAGAGAATAGAATAAAATTTTCAAAATAAGTATC
AACTCAAAAACCTATTTAGTTTAAAAGTTACAAAGAAAATAAAACGAGGGACTTATCTAT
GATAAACAGAAAGTTACCCAGGGGCTGACTGGAAAAGCACAAACCTTTTCGAAGTGATTA
CACAAGCTAGAAGGTGAGACATATTGTGGCAAAAAGGCGTTTTCATAAAACGCTTCAAAA
ATAATATATTCCTGATAGTTGGCCACCCATGTCAGGTTTGAATCTTGACGTCAGCGGTAG
AGAGCTCGCAATGTCGCCGACGACGGTCTACTGTGAACCCGAGAGAGAGGGAGGGAGACA
TGCGCACTCACAAGGGTCCTCCGGGATGGTGGGTGGTGGAAGGGGTTGTTGACGAGCACC
ACATCGACGGTGACTTCCACTCTTGCGGACGGGGGCTTCGGGTGCAGGTTGATCTCCCGG
GAGAGACCTTGAGCCGTCGAATTGGAGCCGGGTTTAAAGGTGTGGGTTCTCAAGAGGGTT
ACTGGACAAGCTAGGGCTGTGAATGCATGCTCACTAGAGCGAATTTAGCCGCAGCCCGAA
GCGGATCAGGGCGACCGGAGGTGGGGAAGAAGACCCTCCAGAGGCTCTCCAAGGGGCTGG
GCATGGTGAAAGGATCGATATGGTT