Contig Data
morexGenes
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Map Locations of contig_101421 (3535 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_101421

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_218 1 1469 bp MLOC_218.1 Available Available LOC_Os07g37850.1, FRAME:+2, EVALUE:3e-36, 13107.m03904 protein expressed protein





CDS Structure of MLOC_218






Contig Sequence (3535 bp)

>contig_101421 3535 assembly3_WGSMorex_rbca.fasta
AAAAAACAATGGCTTCCTCATCCGCGTCAGCATTGTTAGTCAAGAATACCTCCTTGTCCA
TATAATGAACATTAACAAGTCTCCCCATCTAAAAATAACATGAATGAATTAAGCACATCA
ATAAAAATTATTGGTTGCCTAATATCAATCCATTATACACACATCATATCAATACTAAAT
TATTAAACAAAATGTACAACACATCATCTACTAACATATTGAACAAAATGCCCCAAAGGC
CGGAAAAAACTGCAACATATTGAACAAAATGAAAAATGTATTGCATGCATATTACACAAC
ACATCATTTACAATATACAAACCATCTATATCATCTAACAACTACACAAAAATCCCTAAA
ACTAAAATCATCTACTAATCTAACATCATCCATTCTTCAATAATGCTCTCAAAATAAGAG
GTTATAACAAAAATAAACTAGTGGGATTGGGCGAGAATACCTCAAGAATGCTTGGGGGCT
TAGATCCACAAACTTTGATGAAGGAGGAGGTGGATCGGAGGAGGGGGTTGAGGGAGAAGA
GGGGCGAGAGAGAGAGAGCCAGATGCGTTTCTCTGGTGGAGGAGGAAGAAGATGGACTGG
TTGGGAAGGGGTGACTGATTCACTTAACAGGGCGAGACACCAAGGTACGTGGCGTCTGGG
TCTAGAGACCAGACGCCAAGGTCCCCGGCGTCTGGTCATTTATCACATCAGTCAGTCAAC
ACAGTTGTCGGTTGAGCGGGGCCCGTACCAGACGTCATGGTCTCTGATGTCTTCCGTGCA
ACCGAGTCGTCACGAATGTTGACGTCACAGAAAAATATTAAATTGAAAAAGAAAAAAAAG
TAATATCAAATCTGAATTTTGTTTGCCACAAGTGTAAAAAAAAATGTCCCCTGGCTGCAG
CCGCCGAACGCGACAAGCCCCTAGGCACCCTACGTCTCATGAACCCTAGGCACCCTGGCA
CTGCTTGGGCGCTAGCTTTAGCCTTTAGGTAGGAGACAATGCATGTACTGTGCTACCACT
ATATCATGCACTCAACTACCGTTGGGTGAATGAATCTGACAGAATTGCGTGGCGTCGACG
AAACCGAAACGGCGCGCCGTAGGTAGGCCCCGTTGATCTGCGACATGCGAAGCTTCCATT
GTTAACTGGTGGCCCCACAGGTGCTGGAAAAACTGGTGGGCACGGCTACGTGCGGTACAG
TTCAGTATCCTCGATTCGTCTGTTTTGGTGTGCAGTGGAGGCACCGGGTAGGAACCAGTT
TACCATTAATGGTTTCGACATTTGACCGTCATGATTGCATCTATCCATCGACATGCATTC
ATGCATGCATGCGCCGCACCGAGCTTGAAAGAGAAGGGTAACCCAGGTTTCTCAAGAATA
ACAGGATTTGTCATTGAGCAAAGTCGTATAAAAAGTATTGATCGTCGTGTGTAATTTACG
GTGATGCGCATCTCTGCAGCTAAAAGTAACAAATGAATTTTTCTGGGTAAGAACTCAAGG
TTTGAGGACTAGAAATTACAATAGTTTAGGCCTTCCTGAGTCCTGCGAGTACAAGTAGTA
ATATGTCGATTTAGGAAAAGACACTTCCTACTATCTAATGAAAGCTAGTCCCCATTGGGC
ATCGCGCCTGCAGATAGATTATATTGGGAGAGCGGAGAAATAAGTAGCCTCCCCCATGCA
GCAGCGGTGCATAAAGAGCAGGACAGAGTAGTTGGAACCTGGGCATAGCTACCAGATCAA
TAACCACGCAGGGTCCCTCGCGCACCCGTTGTACCCATGTTAACCAACTCGACCGCCCCG
TACGTCCACTTTGCCCGTCATCCATGGCCATCTCCCATATGCTCGTCCCCGCGACGCAAG
GCAAAAGAGCGCACGCGCGGCGCGGCGTTGGTAACAAACGTGTGCCGTGCGATCGATCCA
TCCATCCATCCATACGATCGAATTGAACGCACCGCCTTTTCCCTCCCGATCCTTCCACCC
CGCAGCGCGCCACCGATCCCCGCGTTACGCCACGCGCTCTATATAAGCTCGGCACGGCCA
TCACCATCCACCACACAACGAAAGCAACAGCCAGCGATCGAGACAGCAAGAAAAGCTCAC
TCACTCAGCTAGCTACCACCAGTCCCGATCACAGCGAGCTACCCAGCCACTCGACGCGAT
CGGCATGGCCAGCAAGTCGGCGTCCCTGCTGATCCTCGCGGCGCTGGTGGCCGCGGCGTG
CCTCGCCGGGCAGGGCTCGGCGGCGCGCCATCTGCCGGCAGAGAAACCCGCGGAGGACGC
GGTGAAGCGACCGGACACGTTCCAGGAGGGGACGGCGCTGATCCCGGGGATCGGGAGGTA
CGAACTGGGCACCCACTACATCCCGGACATCGGCGGGCTCGACCACAGCATCCCGGCCGC
CGCCAACGGGCAGTTCATCCCCGGGGCCGACGACACCTGGGTGCCCAACCCCGGCTTCGA
GGTGCCCAACCCTTTCCGCCCCGGCTCCGACTCTCCCTGATGGGTCGAGCACGTCCACGC
TACGCCCATCGCCCGTCCACACGTTGCACCCATCCATCTATTTCGTAGCTAGCCTGCTAT
AAATCGATTTCGCTAGCTTTTTTGGTTGCTACTACAATAAAATAGCCGCTACTACATAGC
CATGCATGCATGTCTGATGCATGCATGTGGCTGCGACTGCCTGCGCGCCGTCGACGTCTC
GTGTTTTGATTCAAGTGGTACGTGTGTATGGGATATGGATGGATGCGTAGGAAGAAGTAT
CCATCGCATGTCTCGCTTGGTTTGTTGTTACCAGTGTAATGTGTTTCAGTTCAGTACGCT
TTTTTTAATGATGAGAAATGGTTTAGCTTGATATATCGCCATCGTACAGTGTGATGTGCC
ATATACAGATATATACTCGTCAATTGCTGCAGAGAGCTCGAACCAAAACCATGGACAGTA
CGGAACACACAGAAGAGCTCAGAGAGTACACGAAGATAGCGTAATAATGAAGTGGACGCA
CCGGAAACGTGGCTCACGGCGGTGGTAGGTGTGTACACTTGTGCCAATGACAGTGCAACG
ATGGAGCCCCTTATTTAGCTCGCTTCGTGACGAGATAAGAGTAGGGACATGATGACAGGA
ATCAGAATAAGCCAGTTCAAATATGGTGTAGCCGGGGTAGCTATGGTGGAAGGGGCCAGA
GTCATTGGTCCCTGCATGGAGTGATAGTCAAAGGCGGATGGGTGAAGGGAGCATTTTGGA
GTAAAGATTTATCTATTTTTTGGAGAGTTGGAAGAAAGATTTAGATAGCCTGCATTTTGG
CACAATGGGTCGAGGAAACATTTTGATTGACATGGAATTTCCTCTTCTTTGCGAGATAAG
AGCAACTCTAACGGGGCGACCCATTTCGTTCGCCGTCGTTCGTTGCGTCCGTGCGGACAA
ATGTGATGGCCCAACGCGTCAACTCATTGTCAAAACGCGTCCGCGTCGATCCATTTTCGG
CCTAAATTTGAGACTGACATGCGTCGGCGCGAAAGCGAAGCGGACGCGCGCGCCC