Contig Data
morexGenes
Links



Map Locations of contig_101356 (4840 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_101356

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_211 2 1052 bp MLOC_211.2 Available Available LOC_Os01g43080.1, FRAME:+3, EVALUE:4e-88, 13101.m04442 protein exonuclease, putative, expressed





CDS Structure of MLOC_211






Contig Sequence (4840 bp)

>contig_101356 4840 assembly3_WGSMorex_rbca.fasta
AACTGTCACAACATTTGGAACAGGGTTATCAACTAGTGTCTTCATTGAGCTACGGGCTCT
ATTTCCTCAACTCTTTCATTTCCTCAAAACGTATGTTGAAGACTTTCATCTGTGCTATTT
GAAGAATTTGTGTGAACACTTTCTCTGAATTTCCTCAACCTCAAATTCTTCACTCAAGTT
AATCTTCACCTACGTTCTTTGTACCTGTGTACTGTGCAAACCGATTCTCATAATCCTCAC
CAAGTAACCTGCTATAGTAGTCTTTGCACTTCTGATCCTGCACTATTTCCGCTGCACTTA
ATTCATCATTGAGGAATTTCCTCACAAGTAATTTCCTCAGCGATGAATTTCTAAAAATCG
CCTATTNNNNNNNTCTAGTCGATATAACGCACTTTAAGAAATCTCTTAAAAGACTTATAT
TTAGGAACGAAGGGAGTACCACTGTAGCTATTGTTCATACTGAAGGTGGCTTGGGGCATG
TGTTCCTGTTGGCTCTACTACTGATCATGAGGAAAGCCATGCCTTTCGTCCTGTTGGTGG
CATTGTTCATCGTTTGATGCCATAAAGCTTCGACGGAGCCGAAGTTGTTCCATGCACCGA
TGTTAACGTGAATGAACCCTATTCGAGCCTTTATGTCCGCCTAAATGTACCGTGTGTATC
TGCACTTCAAAATTATGGGGCCCACAATTTTCGGCTCTCTTTTGCATCGTAGCCCTCAGT
TTGACCGTCCTTTGTAATATGTTCGTCATTCAGACCCGGTCTTGCATGATGGGTCATGCG
AAAATTTTGTACTTTGATGGTTCCCAATTGTTCCAAACAGCTGGCTTCATGTGAGAGGCC
GCCAAATCCTACAGTTGAGCCTGCTATGCCGCCGAGGAAGCCCAATACTCCCTAGTGGGT
GTTAGGTTCCAAGTTCCAAGTAATTTCATCATGCACCGCATCCTCAAGGTTGACCTCCTG
GAGGCCGATCCAAAGGCTTGTAAAACTCCAAAATGCCTTGCACCATACAAGACCCGAGCT
CATGTTATCCGCCTCCACACGCAGCCGTCACCTCCTCTTCGAAAGATCTTAGGGCAGGGG
AACCCTACAACCACCGTTCCGCCTCGTCTCTGGTGGTCCTAGGGCCATTGCCGGTGAGGT
GGATCCCAACCCTTACCAGCGTGTGGGCTCCATTCTTAGATGTTTCGTTAAGTTCTTGTT
AAGGTTTGTGTCATGTTCAGGAAGGTGAGACGCGACTCCTCCTAAAGATGGAATAAGAGC
ATCTACGGTTGAACATTGCAAATATGACCCCCTAAAGCCCGCAGACGTGCCCGATCAGTA
ACCGGATGTGTCCCCTATTTGTCCGTCCAAGCTGTCACACTCTTCATTTTTTTCTTAATA
TGTCCAGACACTTGCACGTGATTGGTGGAGAGGAAGAGAGAGAAATAAAAGAATGAACAC
AGAAAAGAAAAACGTGGTCCGGATGGGGTCACGTCCTATACCGGGAGTGCCCGAGCGCGT
CCGTGAGCCCTCATATCATCCCCACATTTGAGATGGATATGAGGGCTCACGCACAACCGG
GCATATAGGGACGATATGAGGGGTCCGGTTGGGTCAGTTTTTTCCTTTCCTCTCCTGTCC
GGTCACTGACCGGGCGCGTCCGCTGGCGTATGAGGGATCATTTGACGGGTCCGGCTGTAG
ATGCTCTAAGGTTCTACCCGTCTAGCCCTGTTTCGGTGGTGCGTCTAGCTTCGTCGGAGG
GTGTGTGGAGATGTGTCTTCAATGGATCTCGCATGATTTGGTCGGTGATTATTTTTGGTG
GATCTACAAAGATTAAGTCTTCTTTCGTCTATGTTCATGTGTCTTTAGGTTGGATCCTTT
CGATCTACGCGTCTCTTCATCGGTGATGATTGCTATTTTGGTACTGGTCCTATGGGTTCT
TAGCATGACGATTTCTCGATTGTCTACTACAACAAATTTTCCTCGGCTTCGGCAAGAGAG
GGACGATGACGGCGGCACGCCTTCAACTCGTTTCAATGGTTGTAGTCGTCATTAGATGAT
CTACGGATATGAATGTAATTTTATTATTTTTAATGTCTGTTGTACTGTCATGATTAAAAA
TGAATGGGTAGAAAGTTTTCCGCCAAAAAAGAGGAAGAAAGAAGAGCCGGAGCTCATATT
AACTTTTATCATTCGTTTCCCCCTTTAAACATCCACGTTCATATAGGAATCTACGGAACA
CAGTCATGGAGTTTTCAAGGTAGATACATATGATGTTGTGTCAGGGTCATGAGAAGTCTC
GTTCTAAACTAACTCGAGAAAGAACATGTTTTGCCTCTCTACTGAAAACAAGAGAACAAC
ATTTACGTACTCCAGAAGGACAATTGACTACTATTTGCTCTATATGAGGTAACCAGCGCC
TAGCAGGGGATCTGCCTGATGAACCAGCGGATGACCTTGACGGGCATCTGGACGAGGCCC
ACCGCCAGGTTCGCCGCTGCCGCGCAGCACACGCAGCACGGGCACACGCAGCTCAGCGCC
GACCTACGAAAAATAAAGGAGTTCAGCGACAGACTCATCACGTTATGGTGGTTGACAAAA
GCCGAAGCAGAGAAGCCAATGTCGCAAGCAACCAGGAGTTCTGGCTGGCATGCACCAGGG
AGTAGCCAGGAAGAGACGCGCACGCACCCGAGGATCCAGACGACGGCGCCGGCGAGCGAG
AGCACTAACGCGAGGGCGGCGAACGGCAGGCCGATCAGGAGCCCCAGCGGCCGGCACTGC
CAGCCGTCGTCGTCGTGACCATCTGCCCCCATCGTCGATCTCCGGCTTCTCCAGCCAGTT
GTTCTTCCGCAGCGTCCTACGTAGGTGCCTGCGTGCGTGTGGGAAACTGGGAACTGGGAA
GTCCGAAACCGAAACCAAACGGTTGGTAAATAACGCTGTGAATTGAACTCGAACTGTCAG
CACCGAGTACGTGGGCGCGGGGGGACTCCACTCCGGAGAGTGGAGCGGAACCGAACGGCA
GCGTGCGTGGCAGTCCTTTTTGTTTCCGCCAATCACACCCCTTGGTATGTTTTGGTTAAC
TGTTCTTACCAGAGCGTAGAAACGACAACGAGAATGATTGAGAAAACGAATCCGATTTCG
CCTCGAACAGTGTCTGCTCCGGTGGTTTTAAGAGGGGAGATCGGCGCTCTGGTTTTCGCT
TGCGCACATACTGATTCGATCCCGAGTTTCCCTTATCTGGAGTTTGCGAGGCGACCCGCT
CCTGCTCAGAGCGCGCGCATATTGCCGATCATGGCTGCGCGCAGAGTGCCGTACGCACAG
GGGCAGGGCCACCAGCTGCAGCAAGATTTCGATTTCTTCTTGGTAGTGGACTTCGAGGCG
ACGTGCGAGAAAGACGCGCGGATCTACCCGCAGGAGATCATCGAGTTCCCCGCCGTCCTC
GTCGACGGCGCCACCGGCCACCTCGCGTCCGCTTTTCGCTGCTACATCCGCCCGAAACAC
CATCCTGCGCTGACCAAGTTCTGCAGGGACCTCACCGGCATCCGGCAGGAGGACGTCGAT
GGCGGCGTGGATCTCGGCCAGGCGCTCCGGCTGCACGACGCTTGGCTGAAGGCGGCGACG
ACGACGGGGGCAGGGACCAAGAGATGCGATGGCCGCTTGGCCGTCGTTACGTGGGGAGAC
TGGGATTGCCGCACCATGCTCGAGTTTGAGTGCCGCTTCAAGGGCATCGAGAAGCCCTCC
TACTTCGATCGCTGGATCAACCTGAGGGTCCCCTTCCAGGCGGCGCTCGGCAGCGGAGGG
CGGGTCAACCTGCAGGAGGCGGTCCGGGTGGCGGGGCTGGACTGGGAGGGCCGCCTGCAC
TGCGGACTTGACGATGCGCGCAACACGGCGCGCCTTCTTGCTGATCTCATGCTACGCGGG
GTCAAGATGAGCATTACCGACTCGCTGGCGCTGCCACCACCGATCCAGCGGCAGCCGCCT
CACACAATCCGTTGCGACGGCTCCTCAGCGCTGCCACGGCCGCCCATCCGGCAGCAGCAG
CAGCAGCTGCTTTAGCCTCCGAGATACGTTATAAAAACAGAAACTTTTGCTGTAATATTT
GAATTATAAGATTTTTACTTTAATGTGTAAATTATCTGTAATTTTTATGCTGTAATTTCA
TATAAATTCTTTGGTTTTTTTAATTTTTTCACAATTTGTAAGGATACAAAAGTATATTGT
TTAAATTGGTTAATACTGCGGTGGCTCGACGTGTGTGACGTCCTTCTGCTACTGCGATTT
GCGGATGAGGACCACAAAAGGTGTGGTATTGGTGTCAGGACCGATGCAGGGGAAGTGCTT
CTTTGGGTGTGGCAATGGAAGTCATGTGCTATTAGAGCAAGTACAATAAGGTACNNNNNN
CAGGCTGTAAGGATTAAAATACTATAATTTTTACTGAGTTGGATGAGAGAGAAGAGGAAA
GAGAAGGAAAGCGGGCTCTTCGTGAAGAGCTAGCTCTAGCACGTGCTCCTAGTGTTTTGT
GGAAATAAAAGATGGACCATTATATGATAAAAGTAGAACTCTTTTATAGCTAACTATTGT
ACNNNCTAGCTATAAGATGGACTATAAGATGACTTATAGCGGGCAGTTAGCTATACTATT
AACCATGCTCTTAGCCTGGAGCAATTAAACATATATATATTCTCATCCTAGGATACGCTG
CTTATATAGACGCTAAGAGCATGGTTAATAGTATAGCCAACTGCTGGCTATAAGCATTCT
TATAGCTCACCTTATAGCTAGCTTGTACAATAGTTAGCTCTAAAAGAGTACTATTTTTAT
CATATATGGCTCACCTTTCATTCTCACAAAGCACCTCGGA