Contig Data
morexGenes
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Map Locations of contig_100533 (8784 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_100533

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_87 5 2301 bp MLOC_87.1 Available Available LOC_Os06g48030.1, FRAME:+3, EVALUE:0.0, 13106.m05104 protein peroxidase precursor, putative, expressed





CDS Structure of MLOC_87






Contig Sequence (8784 bp)

>contig_100533 8784 assembly3_WGSMorex_rbca.fasta
TTTGTCTATGTATCCATACATGCACTATGTTTCCAATCAATACNNNNNNNNNNNNNNNNN
NNAACGATTATCATGAACGAAGAAATACAATAATAACTAATTTATNNNNNNNNCTAGGGC
ATATTTCCAACAGTGGTGCATGCCGACGTGCGGGGTGGCAGGGTTGGGCCTCTCGATCTC
GATCAAGATCCGGATCTATCTCACCTACGGCCGGCTGCTCGCGGGCCACGGCAGCGGGGC
AAGCTGGGTGACGTGGGGGAAGGCATGCGCTACGGGCATTGCTCCTCTGGAGTCGACGCG
CGGACGCGCAAGGATGCGCTGGGTGTGGTGTGCGGCTAATCTGGCGTGGAGCCCATGGTG
GAGGGGCTTGAGCGGCCTGTACGATGCTCGAGCAGCGGCTTCGGCCGCGAAGGGCATGGC
TTGTGGATGTCTGCGCGGTCCGGCACAACGTTGACGCCCCTAGATGTGCGCGAATTGGAG
GTCCTTGGCTACGAGAAAGTGCGCTCCCGTGTCCGGCCGTCGTGGCCTCCACGAGGTGCG
GTTGGCTGCGGCGGATCTTGGGCTTCTTTGTCGATGGGCAGCTTCAACGGTGGTGTTGTT
GGGTGGGCTTACCGATGCCATTGCGGGATGATGTGCGGTTGTGGCGGTGTGGAGGTTGGT
GAAAACCATGTCTTGGCCTAGTGCCGTGACGAGCGATGGTGGCGGCTGTGGGTGTCGTTG
ACCTTCTTGGAGGCATCGTTGATGTGTTCTCCCACCCCCCTTCACGGATCCGGTCATTTT
GGCCTCTCCGGGGGAAACCCCGATCTATGATCGGACGATGGCGGCGCCTTGATGTCGTAT
TCCCTCTTGGAGGCTTCATCTTGGGAGCTTGGTATCGACGAGCAGGGCCGTTGGATGGAG
GTTGGAAGTGGGTGTGGCGTCCAGGCTTCTGTGGCAATGATGATGGTGGGTGCGATGTCG
GCGACGCGGTCCATGGTTTTTGCCTCGGTTTGTTTGTTGCTACGGAGTCGAAGCTGCGAC
GACGGGGCCCTCTGGTATACGATGACTGGCTGGAGGTAGCCCGTTCGGTGATATCCCATG
GCGCCAGCTGTGCCTAGTTTTGTCCTTCACAGTTCTTCGTCAAAGTCGGAGTTACGTCGT
CTGGCCGTAGGTTCATGTGTCCTCTTCAGGATGAGTTGAGTCGATGATTGCCTATGGTGG
AGTCGAAGTCGTTTGCTCAGAGTGTAGGGATGGCGATGACGCCTTAGGGGAGGAGTGACG
ATGATGACGCGTGCGTGCTGTCTCGTCGAGACCCTTTTTGAAGTAGTGTGCCTGAGCTTT
TTTATGTGTGCCGTTCAATGATTTTAACTGTTTTTATCCAATTTTCTATAATTAACTAGA
CGATTCTTTTTGCTTATATTAATGGATGAGCCAATCTTCACCTTCGTTTTGGAAGAAAAA
AAATGCGCAAGCAAGAAAAGAAGAACACGCCCGCCCGCCGGCCAGCCGGCCTTTTGGACT
CGGCTTCCCTCCCTTTCTCGTCGGCTTCTATTATTCCTCCTCGCCGCTCCTCTGGCTACC
CTTCTTCCCGCGGCACCCGTGCGCGCACGCATGTGTCACGCGTGGGCCTCGGCTCGAGGC
CGCGGCGGCGTATCTAGAGTTCCAGACGCAACATCTTTTTGCACAGCTCTGGGTTTGTTT
TTCCGAGACTTCTCTACATACGCTCTTGACGTGATACAGCTAACTAATGTTCTTGACGTG
ATACAGCTAACCAACAATTGTGCAGTGGCGCTGCTAACCCGGCACATGGCCTGATCAGCG
AGCACGTACACGTTACCCCCATCTCCCCCGCCACCGTTCCCGGGCGGGGGCGGGCGCGGC
GAGTACCGGCGGGCGTCGTGGCGGAGCCCGTGAACCCTTTCCGCCGGACCGGTAACCTTC
CCGTGAGAGGTGAGACGGCTCCGGGCTTGGGTACTTGGAATACTAAAGCCTATCCGCCGC
GCCGAAATGCATGGGCCGGATACGGATACAGCTGCGACGCGACACACCATCTGGCGTGCG
CGACGAGCAAAGCACACGAGCTGCCGCGGAAACGAACAGTGGTCAAGTTGGCCGCTGGGA
TCGTCGAGCCACCAGTAGTTTAATCAAAGGGATCACAGGTTTCAGCGAGTGCCTGTACGC
TGCGTACTGCAAACCCGTACTATTAAATTACGGTAATCTGGACTGTGGTTGCTTAGAGCA
TCTGCATCTACAGCCGGACCCTTCAAATTAAAATTTTCAAATCCATACTATTACATCAAA
CGTGACACGTCTCAAATAATACATTATATATTCGAATACTTCAAATTAAAAATTTCAAAT
CCATACTATTACATGCAACGTAAACCCAATATTAAACCGAGCTCATCCGGCTCTGTCATA
TTCATGTCTCATGGCTGGCTGCGCCTCTCACTGTCGGTGCGATCGCCGACGAGGACATGG
GGCACTAGCCGGCTCACGCGTGTCAAGTTCCCGCCCGTCTTCCATGCCCTACTCTTCCTC
GTCGGAGCTCGTAACCCGGACGGTGACAGTTGACGTGAGGTCGATGATGGATCCTTTCTG
GGGGAGCCGACGTCCACCGCGACGCGGTTGCGTCGAGCACACTACTCCACCCTACGGGGC
GCCAGAGAGTGTGATTCCGCCTCTCCAACATCCGTCATCGCGAGGGCCTCCGTCGCATCC
CGTGACCGCTGCTTCGCCACACGGGCACGCCGTGCCATGACCTCGTCTGAGGTCGGCCAT
GCTTCATGCTCGGCGCGCCAATGGAGGGGTCGCGCTTCCGCCACGGTGTTCGCACGCCAG
ACGGATCGCACCACCTCCGGTGAGGCAACAACGCCAGACCCATGCACCGGTTGTGCGGAA
GCAATGGATTCCCGGCATTGCGAGTCCACGCGCTGCCGTCGTGCGGCCGCCTCTTGGGAG
CGGCAGAGCGGAAGCCGGACGACCATTTCCTCCTCGCGACCGTGTGGGACAAGCTCGTGG
TCGACGGATCTGGATGTGAATGACTCAAATCCGATGTCAGCCATGCCGGATGTGAGCTTG
GGTGGCGAATGAGAGTGGAGTGAAGTGGCTAGGGTTTGGTCTGGCGAGCGGATGGGGACG
AATATATGTGGGGTAGATGAGGTCCAGCGCGGGCCAGTGCGGGCTAGGCGGGCGTGCCTG
GACGCACCCGGGCTTCTCCATATCCGCCTCATATTTGGGCTGGAAATAGGGGGTGTCGGT
CAGCCCGGGTGTTTGAGGCCGGTTTGAGAGGTCCGTATGGATCGGTTTTTTATGACCGGG
CAGCCTGCCCTAGATCTCTGGATTTGGCACGCTTTCTTCGGCATGGCCGGATCTCACAAC
GATATCAATGTTTGCTAGGCTGGTAGAAGGCAATTGGCCGCAGGTCAATGTGGAGATCAA
TGGCCACCAATATACCAATGGGTACTATCTAGGTGACGGTTTCTATTAAAGTGGTCTACT
CTTGTGAAGACAATCTCCAATCCTGTAGGAGAGAAAAGAAAGAGATTTGCCCCAAGAGCA
AAAGAGTGTTTGAAAAGATGTAGGACGTGCCTTTGGCGTTCTTCAATCTAGACGGGCATC
GTTCGATATCCTGCTAGAACATGAAGTACGTATAAATTGTGGGAGGTAATGACAGCTTGT
GTGATCATACACAACATGATCGTAGACGATGAACGTTCAGAACATCTTTCTGATCAAGGA
TTTGAGTTTCAGGGTGATAATTTTGTACCTAAGCATGAAGAAGAGACAACGTTTGCACAG
TTCGTCGAGTTTCATCATAAGATGTGTGATTAGAATACTCACATGCAGCTGCAAAATGAT
TTGGTTGAGCATATGTGAATTTATATCAGCAACCAGTAGTTGTATCGACAACCTTTTCTT
TTAATTGTATCTACTATGAGATATTTTTGTAATTCTTAAATTGTGCAATGTTTTGTATTC
AATATTTATTAATTTAAAATATTTAAAATATTTATCAAAGCGATAAAAAAATAACCGCAA
ATCTGTCGTGTGGATGAAAAATGGATCATCGTGTTAAACGCATGATTAATCTATTTATAA
AAAAGACTAACAAACCAATTAAAACGAATAAAATGCAATAATGTTAGACCTACAAAGACT
TACAAAGGTTTACTTAACCTTCCAAACTAATTCTTCTCTTCCCTGATTTTCGGTGAGGAT
GATGCTTCTCATCCCCAATTACCAATCACAATTCTATACATTAGTTTATACGTAAAATCT
TTAATTAAACCTTTATAGATGTATCATTATTCAATAAAATACGATAAAGCATGCGTACAT
TTGGGTCGCTCGTATGTTTATGAATGCGAGGAGTAGAGGATCACAGCCGTTGGCTGGCTG
GCGCTGGCCTTTTGTTTAGCGCGGAGCCGAGCAGGGCTTGTCCCCATGCCGACGCCTGGG
CCTTGATATTCTCACTCCTTCCCTCGTCCACATCATTGCAGCTCGTAACACTCCATCGCT
CGTCTCCAGTCTACTCCTCTAGCCAGCTGAGCTCCTTCGCCGGCGGGGCGAGCCCAGCTC
ATCTCATCTCATCATATCATCATCTTCCCCATCTATATAAGCCCGCCTCTCTCCCCACTT
AAGGCACGCCGAGTGTTAGCTAGCAGTACACAGATAGTAAGTGTGTGAGGGCAGCGGCAA
GTGCGAGCATCAATTAAGGTCAGGCAGAGCAGGGAGCCAGGGAGAGAGGGATAAGCAAAG
CAAGGAGACCCATAGTTAAGAGTCCAAGGGAGGGAGGGAGACACGCAGCTCCTATTGTAG
TGGATGGCAATGAGGTCGAGGGGGTTGCAGATGCGGCCGCGGCGGCAGCAGAGCCAGAGC
CAGAGCCAGAGCGTCCTCGTCGGCGTGTTGCTGCTGCTGCTGGCGACGGCGGCGCCGCAG
GTCGCAGCGGCGGCGGGGCTGAGCCAGAACTACTACGCCAAGACTTGCCCCAACGTGGAG
GCGCTGGTCCGCGGCGCCGTCACCCAGAAGCTGCAGGAGACCTTCAACGCCGCGCCCGGC
ACCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAGGGTACGTACGCCGTCGCTGCTTCTT
CGACGACTGTGGTGTTCGACTGCTGCTCTGCGTCGATTGATGGAATGGTTGGTGTGATGG
GCGCGTGCAGGGGTGCGACGCGTCGGTGCTCATCTCCGGGCCGGGCGACGAGCACAGCGC
GGGCGCGGACACGACGCTGTCGCCGGACGCGCTGGACCTCATCACCCGCGCCAAGGCCGC
CGTCGACGCCGACGCCAGCTGCTCCAACAAGGTCTCCTGCGCCGACATCCTCGCCCTCGC
CACCCGCGACGTCGTCCAGCAGGTACGACGCGCACAGCAAACCCAGCCTCTCTCTCCCCG
CGCCGCCGCTTTCGGCCTGAAAAAGCGCGGCGGAGCGCCGTTCGGGTGCCGCCGCTTTCC
CTGGTCGACGGCGACGCGCGGCATCAATTAACAGAGCGTGCTCCTAAACCCTCACTTAGC
CTATTGAGCTCTCCGTGTCTTATATTAGTGCTAACCGCGCCGCGCCTGCCCGTCGGCGGA
CAGCCATGATGGGCGACGGGGCTGCGCACTGGCGCTCCAGAGCTCTCTGTCTCTGCAGCC
GCAGCGACGAGCCTTGTCTCTCTCTCTCTCTCCTAGCTGTATGTCAGTGACGACGCCATT
ATGCCTCCCCCTGTGCCGGGAACACGTACGTACGCGCCCACGCGCCATGCCCGCTCTGGA
CTTTGTGTGCGCGCGCCGCAACCTCGGTGGTGCCGAAACCATGGCCGGCCACCGGCACAC
AGTAGCTAGCCAGGATCGAACATCGGAGTAAGTGGCGCTGCCCAACAAACAACTACTCGT
ACAGTACACTCCAAGCCACTCGATTAAGTACCACCAGTACTCCTAGATTAGTGCTATAGT
AGTAGTGTAGTACGACCGCTGGATTAAAACTACCGATACATACATGCCACTTGCTATATC
GATCTTAGCATCGGTTGCAACATTCTCGGTTGTTCGACTAGATTGTAGATTGTTTCGGGT
AAAAAGCCCGAAAAGTTCGGATGTTTTGGCGCTAAAACTTGGGTCGTGGTCCCGGCCGTG
GGAGCGAAGCTGGTCGGAACTCCGCTGTCGTATTTATTCATTAGTCCATCCCATCCAGTA
GCAGCCCTGCAGCAGTCTTCTTCCATAGTCCAGAGGGCACGCACGCACGTCGTGAAGAAA
AGCGTGGCGCGTACACACGGTTTGGCCGCGTAAATGAACCGCGTACGTACGTAGGAGTAC
GCATGACCACTGTGGCGGCAGCGGCAGAGCTGCTGCGGAATTAACCCCGTCAATTATTGC
GAGCCGTGGTCTCGTACTGTGCTGTAATAATCTGACTGTTTGGTTTTGTGCTGCAAATTA
ATGGCGATTCTTGTTCGCAGGCGGGAGGGCCGTCGTACCCGGTGGAGCTGGGGCGGCTGG
ACGGCAAGGTGGGCACGCGGGCCGTGGTGAAGCACAGCCTCCCCGGCGCCGGCTTCACGC
TGGACCAGCTCAACAAGCTCTTCGCCGTCAACGGCCTCACCCAGACCGACATGATCGCCC
TCTCAGGTCAGTACTAGCAGTACGGTTTGCTTCCTTGCTTGCTTGATTGATTGATAATCC
CCTCGCTCGCTCCGGCAACAGGCATCACGCCGAAACATTCCCTCTGAATTATTAGCCGCT
CAACATAGATACATACATGGACAGATACTCTAGTTGGAACGGTGGTTAGCAAGTCCCATG
CCCACCCAACGAGAGTGCCCAGCCGGATGGCTGGAAGCGGCGCCATGAGGGCGCTCATCA
CTTCCCTACTACAATCCCTATCACCAGGACAATGCCCCAATCGTACCACTTACTGACGTG
AAAAGTTACTACTACAGTTTACTGACGTGAAAAGGCAACGAATGTTTACAGGGGGGCACA
CGATCGGGGTGACGCACTGCGACAAGTTCGTGAGGCGGCTGTACACGTTCAAGGGGGCGA
GGCCGCAGTACAGCCCGCCGATGAACCTGGCCTTCCTGCGGCAGATGCGGGGGACGTGCC
CGCTCAACTACAGCCCGGCCACCGTCGCCATGCTCGACGCCGTCACGCCGCTCAAGTTCG
ACAACGGCTACTACCAGACGCTGCAGCAGCAGAAGGGCCTGCTGTCGTCCGACCAGGTGC
TCTTCGCCGACCGCCGCTCCCGGGCCACCGTCAACCACTTCGCCGCCAACCAGACCGCCT
TCTTCGACGCCTTCGTCGCCGCCATGGCCAAGCTCGGCCGCATCGGGGTCAAGACCGCCG
GCTCCGACGGCGAGATCCGGCGGGTCTGCACCAAGGTCAACTAATATCAATATATCATGG
TAGCTGCAGCTGCCATGGTAGTAGCATCACACGTACATTCAGTAGAGAGCGTAAATGGAT
GGACGGGCCAATCAATTCCATATGCTCACACATGTCGATCGATCATATTGTCATAGCCGA
TTTGTTCCAGCCCGATTCTTTTCTTCACCATGTAATAAAGCATGTAGATGCCATGGGATA
GGAGGCGAAGTTGCGTCGATGTAAATGTTACGGTTTGGTCCGGTTAATCAACAGGTATAT
CCCATACTATGAATGAATATCAAGTTATTCTTTGATGCAAGAACATTTTACTAGTACTGA
ACGTAGTACAGTACAGAGGATGTACTAACTAGTATGTGAACTTGAATGGTCTGTGCACTG
AACTGTATGGCATGGTGGCTCCAGCCAGCTGGTGACAGAGGATGCAACGTGCATGGATGG
TCCAAGTTTCTCATAACTACGGCCAAGGTGAGCTGTGAACAGCTGCAAGGAACCATGTGA
TGTTTGCAGTCAAACATCCAAGGCTCCAAGTACACCTCAATACACCCAGGAAATGATAAG
GAACAACAGTATGGGGTGTGTTTGGTTACATTGGCAATCGAGTCTAGCCCGACTAGCCTG
GCTCTAAGCGCCGGTTTGAGAGGATGCAGGTAAAAAGACCCCAGATGCACATAGTCTGGT
TGTCTGCATTTATCTTAGTTGCATGAGACAACCATTTTTGACCCGGGTTTGGTTGCCTGC
ATTGCATTAGGCGCACATATGACATGGTGTTTGGTTGCAACCTGCATAAGTTGTTGTCAT
CACTTCTAACTAGTGGCGAGCTTACCGCACACAATCTGAATATGTAGTGCCAGCTAGTTA
AACAAATGACAATTCATCCTAACTACTATCAAATGATAGAACAAATTATTAACATCCATT
GGCTAAATTGGGGATAGTTTATCGATGTTGCTGCTATCAGATCTTCCTCTTCATCTTTCT
CTTCTTGTGCTTTTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATCATGCAC
TGACCTATGTTAAGCCACATTGCCTCTGCCCATTTCAACCTTTTGTTCTTCCAAGCGTCA
TTGTCAAATGCCTTCACACCATGGTCGGAGCTAACAACATGATCAGGCTCGACCTCTTTC
TCCTGAAGCACGTGTTCTTCAAAGCCCCACTTGAGGATCCAGTTATGCAGAATGCAACAA
GCAAGAACAAGCTAAACCTGAGTGGGGTATGGGTGGAATAGCTTGTGATCCAGGATCTTA
AACCTATTCTTCAGAGCTCCAAATGCCCTCTCAACAGTTACTCTAAGGCTGGAGTGTGTG
AGATTAAACAACTCCTATACAGTCCTAGGATAATTCCTACCACTGAACTCGTTGAGATGG
TATTGTTGGAAATATGCCCTACAG