barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_9977_PI390587928Hv_44K_v2TTTTGTAAGAGCATCTCCAACGATAGAGCGGCGCGCTATTTTCTTTTTGTCTTCAAAAAA703GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_60978.28933e-21801 - 8579856 / 57plus ABC03426 ABC03427 ABC03429 ABC03430 ABC03432
JLOC1JLOC1_39801.19972e-21826 - 8829856 / 57plus
Harvest35U35_154127733e-25704 - 76310060 / 60plus



Contig Sequence (773 bp)

>U35_15412 773 Hv_44K_v2
CACGAAGCAAGTGTGATCTAGCCACTACCTGCATCCTGCTGTTAGTAATGACGACCATGG
TTGCCTTGAGCTCCTTCGCCGGTGCTGCCGCCGTCGGCCGCCCCGCCTCCTATTCTCCGG
CGCTGCCGCGTCGGCGCGCCCTCCTCGTCAGGGCCCAGACCGAGCCGGATATCGAGCCGA
CCAAGGAGACGACGAGCGCATCGACATCCTCCCCAAGCCCGAGCCCAACCCCAAGCCCGG
TGGCGCCCAAGCCCAAGCCCAAGGCAAACCCCTCGGTCTGGGACGCGCTCGCGTTCACCG
GCCCAGCGCCGGAGCGCATCAACGGCCGGCTCGCTATGGTGGGCTTCGTGGCGGCGCTCT
CCGTCGAGGCAGCGCGTGGCGGCGGCCTACTCGACCAGGCCGGCAGCGGCGCCGGGCTGG
GATGGTTCCTGACAACCGCCGCGGTGTTTTCGGTGGCGTCGCTGGTGCCGCTGCTTCAGG
GCCAGAGCGTGGAGAGCAAGAACAGCGGCGTATGGAGCGCCGACGCTGAGCTATGGAACG
GCCGCTTTGCCATGCTCGGCCTCGTCGCACTCGCCGTCACTGAGTTCATCACCGGCACGC
CCTTCGTCAACGTCTGAAACTAGCTAGTGTGGTGCAGTATTCTTGTACGTGCATGTACAT
ATTTGTTGGTCATGCTGAGGAACTAATACCACGGATTCTGACATTTTGTAAGAGCATCTC
CAACGATAGAGCGGCGCGCTATTTTCTTTTTGTCTTCAAAAAAAAAAAAAAAA



Homology of Contig U35_15412 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os07g08160.11933e-56protein|early light-induced protein, chloroplast precursor, putative, expressed
Brachypodium v1_2Bradi1g55560.11898e-73
Arabidopsis v10None