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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_9800_PI390587928Hv_44K_v2CTGTTTAATCTGGGTCGAGAGCTTGAGGGTGCAAGAAGTATTTCTTTCATCATTGTCAAA664GeneList: brown
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.5752.6041.3380.5520.1990.368
Raw 106.421166.20275.07150.1215.48312.274



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_111707383e-25665 - 72410060 / 60plus



Contig Sequence (738 bp)

>U35_11170 738 Hv_44K_v2
TTCATCCTTACACTGAAATTCAAATTCTCGCAGCTTATGAACGCGTGTAGCAAAGTAAGG
AATGAACAAAGTGAACTTGGCTTGATAATCAAGGAGGGTGGAACAGTTGGATGGACATGA
ATACCTTAAAGTTTTTGTCGATGTGGGAGCTTCTACCGATGCGAAGCTGGAAAGATGTCA
TAGGCATGAAGTACTGCACATGGGGATTCAGTTGGAGTAGCTTATTTGCACTGGTGATCT
TGTTTCACTGCACAAACAGAACTTCCATCCCGTGCAATTCGGATTAGCCGCGGTTAGCAT
CATGGTCTTGCACATTACTCTGGTCGACACCCTGCAGGCTGGATGGCAAATGTACATTTG
TTCGCACAGTACCATTCAGAACAGGACAAAACAGCTGCAGTTCAGGAGTTGTGATGTGAA
CGATGCGTCTTCGATTTCTGTTTTCTGGCAATCGGTACGTTGCCTTCTGATAAGGTCAAC
GCCCAGCACGGCGTGCAGTCACCGTGTAGCATCATTGTCACTATTACATTGGGAGAGTTA
CCAGTGGCAACGGGAGATGTTGTGGTTCCCCTTTTATTTATTTCAAATTTGGTAAAATTG
AAATGGCTGTATAAACCAACTTGCTGTCCTATCCTTTCTTAACATGGGTAATGTGTGGAA
GTGACTGTTTAATCTGGGTCGAGAGCTTGAGGGTGCAAGAAGTATTTCTTTCATCATTGT
CAAAAAAAAAAAAAAAAA



Homology of Contig U35_11170 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None