barSeed
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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_9658_PI390587928Hv_44K_v2TCATCTCTTTCTTGTGGGGATAAATATAAACCTTACAGGTCTTTAAATAAGGACGTGTTG59GeneList: lightcyan1
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0270.0891.1292.1021.2822.373
Raw 9.36642.177529.4581271.016337.472679.412



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_412886043e-2560 - 11910060 / 60minus



Contig Sequence (604 bp)

>U35_41288 604 Hv_44K_v2
TTTTTTTTTTTTTTTTTAAAGAAAGATAAATTCCATATTTTTGTGTGTCCATCATAAATC
AACACGTCCTTATTTAAAGACCTGTAAGGTTTATATTTATCCCCACAAGAAAGAGATGAT
AAAACTAGTGTATTGCTGCTGGTCGTAGGCATCTAATCTTGCACGGGCAGTTTATGAAGC
ATTCTCCGAAATTCGGCCAGCACAGCCTATCCTTTTTACAGCAAAATGGTTGGCCTGGGA
CCTGGTGCACGTTCTTGTAACAAGGGGGGCGGACTACGTGGCTTACTTCGATCTTCCTGT
TGATTTCCTTGTTGTTTGTGCCTTCACCGTGTGCGTGTCCAAGACAGGCAAAACACATCA
CCAGAATGAAACAAAGTAGCACAAACCCTTGGACACTGTTTCTCATGTACTTGGTCATCG
TTGCTGAGGATCGGAGGTAATGTTGAGTACTCCAGGGCAGTTACAGATGGCACAAAATGG
ACTTTGTTTCTGAATCACTCAGCTATAACTGGAACACCGAAAAAGATAACTTTCTTCACA
TGCCCCTTATCCAATTATCTGAATGCATGCAACCAACAATACTCAGCACATCAATCCCCA
TATG



Homology of Contig U35_41288 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None