- Probe CUST_9547_PI390587928
- Source Contig U35_13898
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_9547_PI390587928 | Hv_44K_v2 | CGGTTTGCTGTGGTTATGTATTTATGTCAATATACTGTAAGTTGAACTACGTCAATACTG | 27 | GeneList: darkmagenta MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 4.673 | 3.455 | 1.281 | 0.618 | 0.268 | 0.139 |
| Raw | 301.638 | 355.485 | 115.539 | 94.350 | 11.992 | 6.974 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest21 | ABC24050 | 123 | 3e-25 | 37 - 96 | 100 | 60 / 60 | minus | ABC24050 |
| Harvest35 | U35_13898 | 123 | 3e-25 | 28 - 87 | 100 | 60 / 60 | plus |
Contig Sequence (123 bp)
>U35_13898 123 Hv_44K_v2 CCCCCCCCCCCCCCCTCTCCCCCCGCGCGGTTTGCTGTGGTTATGTATTTATGTCAATAT ACTGTAAGTTGAACTACGTCAATACTGAAATAAGGAATTGCCATGTAAAAAAAAAAAAAA AAA
Homology of Contig U35_13898 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |