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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_9107_PI390587928Hv_44K_v2TGGTGGCAGAGCACATGTGAAAAATAAAACAATGGGCTCTTGCAGAGCATGGAGAAAAAA737GeneList: None
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.8491.4000.7450.6370.9721.039
Raw 12.69114.3496.8558.4763.2974.883



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_44072.124559e-22365 - 41910055 / 55minus ABC10778 ABC32013 ABC43508
JLOC1JLOC1_28529.120896e-211 - 5310053 / 53minus
Harvest35U35_188838273e-25738 - 79710060 / 60plus



Contig Sequence (827 bp)

>U35_18883 827 Hv_44K_v2
CTCCCCTTTCCTACTTTGCTGGATTCGGTCACACCCCCACGACGTCCACAAGTCAATGAC
AGCGGGCCAGCCTCAGGCGGGCAGCGGCGCGGAGTTCAGTGCTGGGGGACGTCACCGGCG
GGAAGGCGGCGCGGGCCGTGTCGTGCCACCAGAGCCTGTTCCCGTACCTGGTGTACTACT
GCCACTCGGTGCCCAAGGCGCGGGTGTACGAGGCCGACATCATGGCCGCCGACGCCGGCG
GCGGCCGGAAGATCAACCGCGGGGTGGCCATCTGCCACCTCGACACGTCTGACTGGAGCC
CGAGCCATGGCGCGTTCGTCCTCCTCGGCGGCGAGCCCGGCAAGACGGAGGTCTGCCATT
GGATCTTCGAGGGCGACATGACGTGGACGGCCGCAGATTGACCGATCGATGCCATGGCAA
GTGCTTAAGCCAGACTAAGACAAAGGAGTAGCGGTACATTTACCGGGTTCAAATTTATGT
GTGGTGGTCTTGTGTACGTATGGACCATCGTCCAAAAAGAAGAACGCGTTGAAAGAAAGC
GTGAGCTGAGCTGAGCTGACCGAAGTCCCCTTTATGTTTTGTCCATGGCGTTCATCATGA
AAAGCGATGCTTGGATTCCTGGTGCGATCGACATGGGCGGCCAAAAGGCAGCTTCAAGTG
ATCGATCCATCGATCATGCGCGCATTGCATGTCGATCCTCTCGGAATAATGAGGAAATGA
TCCTCTTGGATTTTATGTGGTGGCAGAGCACATGTGAAAAATAAAACAATGGGCTCTTGC
AGAGCATGGAGAAAAAAAAAAGATAAACCCCACAAAAAAAAAAAAAA



Homology of Contig U35_18883 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None