- Probe CUST_894_PI390587928
- Source Contig U35_22855
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_894_PI390587928 | Hv_44K_v2 | GTATGTGATTTGAAAACTTGTGAAATTGAAACTTGACCAGTGGGGCCACTTTATGAAAAA | 828 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_78538.1 | 1979 | 6e-24 | 1906 - 1964 | 100 | 59 / 59 | plus | ABC17160 ABC19613 ABC41272 |
| MLOC | MLOC_78538.2 | 2837 | 6e-24 | 2764 - 2822 | 100 | 59 / 59 | plus | ABC17160 ABC19613 ABC41272 |
| MLOC | AK359718 | 1114 | 9e-22 | 1060 - 1114 | 100 | 55 / 55 | plus | ABC17160 ABC19613 ABC41272 |
| JLOC1 | JLOC1_52346.8 | 1139 | 3e-24 | 1066 - 1124 | 100 | 59 / 59 | plus | |
| JLOC1 | JLOC1_52346.7 | 2032 | 3e-24 | 1959 - 2017 | 100 | 59 / 59 | plus | |
| JLOC1 | JLOC1_52346.6 | 1904 | 3e-24 | 1831 - 1889 | 100 | 59 / 59 | plus | |
| JLOC1 | JLOC1_52346.5 | 1133 | 3e-24 | 1060 - 1118 | 100 | 59 / 59 | plus | |
| JLOC1 | JLOC1_52346.4 | 1896 | 3e-24 | 1823 - 1881 | 100 | 59 / 59 | plus | |
| JLOC1 | JLOC1_52346.3 | 1945 | 3e-24 | 1872 - 1930 | 100 | 59 / 59 | plus | |
| JLOC1 | JLOC1_52346.2 | 2803 | 3e-24 | 2730 - 2788 | 100 | 59 / 59 | plus | |
| JLOC1 | JLOC1_52346.1 | 1185 | 3e-24 | 1112 - 1170 | 100 | 59 / 59 | plus | |
| JLOC1 | JLOC1_49413.9 | 1041 | 6e-21 | 937 - 995 | 97 | 57 / 59 | plus | |
| JLOC1 | JLOC1_49413.8 | 2293 | 6e-21 | 2189 - 2247 | 97 | 57 / 59 | plus | |
| JLOC1 | JLOC1_49413.7 | 2402 | 6e-21 | 2298 - 2356 | 97 | 57 / 59 | plus | |
| JLOC1 | JLOC1_49413.6 | 1069 | 6e-21 | 965 - 1023 | 97 | 57 / 59 | plus | |
| JLOC1 | JLOC1_49413.5 | 876 | 6e-21 | 772 - 830 | 97 | 57 / 59 | plus | |
| JLOC1 | JLOC1_49413.4 | 762 | 6e-21 | 658 - 716 | 97 | 57 / 59 | plus | |
| JLOC1 | JLOC1_49413.3 | 914 | 6e-21 | 810 - 868 | 97 | 57 / 59 | plus | |
| JLOC1 | JLOC1_49413.2 | 924 | 6e-21 | 820 - 878 | 97 | 57 / 59 | plus | |
| JLOC1 | JLOC1_49413.1 | 2044 | 6e-21 | 1940 - 1998 | 97 | 57 / 59 | plus | |
| Harvest21 | ABC17160 | 900 | 3e-25 | 829 - 888 | 100 | 60 / 60 | plus | ABC17160 |
| Harvest35 | U35_22855 | 900 | 3e-25 | 829 - 888 | 100 | 60 / 60 | plus |
Contig Sequence (900 bp)
>U35_22855 900 Hv_44K_v2 CAGATCGAATTAGCTGGTCCTAAAGAAATGCTCCGCCTAAGCTTTGCTTAGTGGCTGGTT ACATATCTGAAAAGTGCAACGCAGGTGAAAAGATTAAATACCTTGTCATGCTTGCAATAG TTTACACTGAACTATTTTTTGTAATCTATCTTACTATACTGGTTCCAAGTGCTTGAGTAG CACCTCTGAGATAAGTCACTTGTGGTTAATTAGTAGCTTTATCATTTGTGTTTGTGCATT CTTTTTTCGTGGGCATCATTCATGGTTGTCTAGTAGTCGACATACTATTGTTCCCTTATC TTGTTATGGAGCAAATTCGCTATTGTTGTTCTATGCAAGAACTAGTGAGAAACTTGAAGA AATTTTAGAAGCTGGAACACATAACTAGTTTGTTTGAACAAGGCTAATTCACTCTATTAT GTCATTTCAGTCAGCTGAAATGAATTTTCCATGAAATCTCTGTGAGAACTACTAAAGAAG TTGAAGAAGTTTAGAAGTCAGAAATATATATCTATTTGGCTTTTTAGTTCGCTTGAACAA AGCTGATTCATTCTACTTTATTTTGTCATTTCAGTCAGATGAAGTTGCCATGAAATCTCT AGAGCTTGATGGATACGAAATACTTAAAATTGTGGTGTTTCCTCTTTTATATTAAGTCGT GAAGTGTGGAGCAAGTGTGAAGCCGTGAAGTGTGAAGCCTCGTGAAGTCCTACTCACTGA AGAGTAGCATATTGTAGCATATCTGTCTTGTAAAGATTGTAATAGATTTATTTAGTGTAT ATTTAATGTATCTTATGTGTTCTTTGTTTCATTTGAAATATTGATTATGTATGTGATTTG AAAACTTGTGAAATTGAAACTTGACCAGTGGGGCCACTTTATGAAAAAAAAAAAAAAAAA
Homology of Contig U35_22855 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |