- Probe CUST_8865_PI390587928
- Source Contig U35_31975
Probe Details
Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
---|---|---|---|---|
CUST_8865_PI390587928 | Hv_44K_v2 | AAACACTCTCCTTGGCCGCCGACCGCTCGATCATCGGCGAATCACCACGTACGGAGCCAT | 26 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
---|---|---|---|---|---|---|---|---|
MLOC | MLOC_38148.2 | 1794 | 2e-24 | 1684 - 1743 | 100 | 60 / 60 | minus | ABC38185 |
MLOC | MLOC_38148.3 | 1799 | 2e-24 | 1689 - 1748 | 100 | 60 / 60 | minus | ABC38185 |
Harvest35 | U35_31975 | 275 | 3e-25 | 27 - 86 | 100 | 60 / 60 | plus |
Contig Sequence (275 bp)
>U35_31975 275 Hv_44K_v2 GCCGGCAACAACAACCAAAACACAACAAACACTCTCCTTGGCCGCCGACCGCTCGATCAT CGGCGAATCACCACGTACGGAGCCATGGGAGGCGAGTCAGGTCACCAGGAGCCGTCGCCG GCGAGCGCACGGCCACACGTGCTGCTCCTGTGCAGCCCGTGCATGGGGCACCTCATCCCT TTCGCCGAGCTGGCGCGCCGGCTCGTCGCGGACCACGGCCTGGCCGCCACGATCCTCTTC GCCGCGGCCATGGATGCTCCCTCCGAGCACTACGC
Homology of Contig U35_31975 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|---|---|---|---|
Rice v7 | None | |||
Brachypodium v1_2 | None | |||
Arabidopsis v10 | None |