- Probe CUST_8669_PI390587928
- Source Contig U35_26318
Probe Details
Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
---|---|---|---|---|
CUST_8669_PI390587928 | Hv_44K_v2 | ACCATAGGTGAGATTCGTGTTCTGAACCCACACATATCATGGGAATGCAACTACACCAAC | 561 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
---|---|---|---|---|---|---|---|---|
MLOC | AK252642.1 | 2608 | 2e-24 | 361 - 420 | 100 | 60 / 60 | plus | ABC13383 ABC30738 |
MLOC | MLOC_13765.3 | 1402 | 2e-24 | 781 - 840 | 100 | 60 / 60 | minus | None |
MLOC | MLOC_13765.2 | 1573 | 2e-24 | 838 - 897 | 100 | 60 / 60 | minus | None |
MLOC | MLOC_13765.1 | 1867 | 2e-24 | 839 - 898 | 100 | 60 / 60 | minus | ABC41162 |
JLOC1 | JLOC1_9350.2 | 2740 | 8e-25 | 558 - 617 | 100 | 60 / 60 | plus | |
JLOC1 | JLOC1_9350.1 | 2735 | 8e-25 | 553 - 612 | 100 | 60 / 60 | plus | |
Harvest21 | ABC25455 | 662 | 3e-25 | 562 - 621 | 100 | 60 / 60 | plus | |
Harvest35 | U35_26318 | 662 | 3e-25 | 562 - 621 | 100 | 60 / 60 | plus |
Contig Sequence (662 bp)
>U35_26318 662 Hv_44K_v2 GCACCCGACCTGACCGAAGTGACCAACCCCCAATCCAACCCTTCTTTGCCGCCTCGCCGG CGAGATGCCTGGCGCGGCCGACGGGGAGGCCGGCTCCACCTCCGCCCCACAACACCTCAG GGCTCTGCTCCGCCTCTGGAGAATTCCGGCAGCCAGCGCCGCCACGGCGGATCCGAGTAT TCGACGCTGCATACCCTCGGGCCCCGCCTCCTCCGGCGTCACTGCTCCTCCGCCCCGCTG CTCCTCCGCGGCCGTATTCGGCCGACGCGCTGTTCTATGCTCAGGGCCACCAGACGCTCC CTGTAAGGTCAGAAACTCTTACTACTTGTTGCTGCCACCCTAGTCCTACATCATAGTACT ACGGCTAATGGGGCAGGGTCCTCTGGGGGCATCAGCATGGCACAGCCTGGCTGCCCAGAT AAGTGTGGCAACATCAGCATCCCGTACCCGTTTGGCACCGGAAAAGGCTGCTTTCAAGAA CCCTTTAATGTCACATGCAATCAGACCGGGGCGTATCTGGCCTCAACCGAATCGGAAGTT AGGGTACTGGATATCAATCTTACCATAGGTGAGATTCGTGTTCTGAACCCACACATATCA TGGGAATGCAACTACACCAACGGCACCAGTGGCAACGGTTCGGATGGCTTAAGCCTTGAT GC
Homology of Contig U35_26318 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|---|---|---|---|
Rice v7 | None | |||
Brachypodium v1_2 | None | |||
Arabidopsis v10 | None |