- Probe CUST_864_PI390587928
- Source Contig U35_22860
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_864_PI390587928 | Hv_44K_v2 | TGGATGCTTGGGTGAATGATTATAGATGACTGTCGACCTCTTTCTTCTATACGTGCGATG | 549 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK359718 | 1114 | 2e-24 | 587 - 646 | 100 | 60 / 60 | plus | ABC17160 ABC19613 ABC41272 |
| MLOC | MLOC_78538.5 | 1704 | 2e-24 | 642 - 701 | 100 | 60 / 60 | plus | ABC17160 ABC19613 ABC41272 |
| MLOC | MLOC_78538.3 | 1768 | 2e-24 | 660 - 719 | 100 | 60 / 60 | plus | ABC19613 |
| MLOC | MLOC_78538.8 | 1879 | 2e-24 | 638 - 697 | 100 | 60 / 60 | plus | ABC17160 ABC19613 ABC41272 |
| MLOC | MLOC_78538.1 | 1979 | 2e-24 | 673 - 732 | 100 | 60 / 60 | plus | ABC17160 ABC19613 ABC41272 |
| MLOC | MLOC_78538.4 | 1166 | 2e-24 | 660 - 719 | 100 | 60 / 60 | plus | ABC17160 ABC19613 ABC41272 |
| MLOC | MLOC_78538.7 | 1121 | 2e-24 | 640 - 699 | 100 | 60 / 60 | plus | ABC17160 ABC19613 ABC41272 |
| MLOC | MLOC_78538.2 | 2837 | 2e-24 | 673 - 732 | 100 | 60 / 60 | plus | ABC17160 ABC19613 ABC41272 |
| MLOC | MLOC_78538.6 | 2533 | 9e-22 | 640 - 694 | 100 | 55 / 55 | plus | ABC17160 ABC19613 ABC41272 |
| JLOC1 | JLOC1_52346.8 | 1139 | 8e-25 | 631 - 690 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_52346.7 | 2032 | 8e-25 | 631 - 690 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_52346.6 | 1904 | 8e-25 | 633 - 692 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_52346.5 | 1133 | 8e-25 | 633 - 692 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_52346.4 | 1896 | 8e-25 | 633 - 692 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_52346.3 | 1945 | 8e-25 | 639 - 698 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_52346.2 | 2803 | 8e-25 | 639 - 698 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_52346.1 | 1185 | 8e-25 | 642 - 701 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC17269 | 609 | 3e-25 | 550 - 609 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC27877 | 678 | 2e-22 | 570 - 624 | 100 | 55 / 55 | plus | |
| Harvest35 | U35_22860 | 609 | 3e-25 | 550 - 609 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_28806 | 678 | 2e-22 | 570 - 624 | 100 | 55 / 55 | plus |
Contig Sequence (609 bp)
>U35_22860 609 Hv_44K_v2 CTTCTTTCTTCCTCTCAGCAACAAGCAACACATAGCCACACACTCCTCCCTCATCCCCAT CTCTCTCCCGCTCGACCCCCTCTCGCCGCCGCCACCAATGGCGCCCCGACCCAGGCGACC TCCGGAGTGATCCCCTTGCTCCTCTCCTCCCCCATCACGTGCTCCTCCCCACTCGCGCGC CCGAGCCGAACCCTACATGCGCACGCGCGCCAGGGGCCTCCCCGATCTGTGAGATGTGGT GAAGTTGCATGTCCTGATGGCCGCAGCGTAGGCCCACACGGGTGGACGGATGGACGACAG CGACGGCCAGGGCGCAGGAGAGAACTGTTGGCCGACCGGGGCCTCCAGCCATGGCAGCGG CGGCAGTGACGGGGTGCAGCTGTTCCGCCATGGCTAGGGCATTTGCAGTTTATTCCAATC CGATTTGCTAGATCGGAGCACCTCTACCTTATCCACTACGCCGGCCTGCTACAACCGTCG GCGAGCTGCCCGACTTTCCCCCCTCTCCGCCCGACGGCGATGCCTGAGTGACATCTGTCG CCGGCCCAGTGGATGCTTGGGTGAATGATTATAGATGACTGTCGACCTCTTTCTTCTATA CGTGCGATG
Homology of Contig U35_22860 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |