- Probe CUST_8551_PI390587928
- Source Contig U35_50775
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_8551_PI390587928 | Hv_44K_v2 | TTTTCTAAGCCGTGAGTTCCCATGGGATGCGCAGCTATATAACTATATATGATGAAAAAA | 8 | GeneList: red MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 1.544 | 1.649 | 1.185 | 0.717 | 0.201 | 0.232 |
| Raw | 370.130 | 630.427 | 385.928 | 371.182 | 36.355 | 45.781 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest35 | U35_50775 | 115 | 3e-25 | 9 - 68 | 100 | 60 / 60 | minus |
Contig Sequence (115 bp)
>U35_50775 115 Hv_44K_v2 TTTTTTTTTTTTTTCATCATATATAGTTATATAGCTGCGCATCCCATGGGAACTCACGGC TTAGAAAAACTACTTTGGTACAGCCAACAATTTGCCATGATGATCAGCCTCGTGC
Homology of Contig U35_50775 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |