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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_8247_PI390587928Hv_44K_v2ATGTGTAAGCGGATGAATGAGTTATCTTGTAATGAACCATCAGTTTCTTGTTGCGTCAAA14GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_45736.14609e-2289 - 1469857 / 58plus ABC31744 ABC46474
JLOC1JLOC1_29671.14405e-2288 - 1459857 / 58plus
Harvest21ABC464745583e-2515 - 7410060 / 60minusABC46474
Harvest21ABC352055728e-2139 - 969756 / 58minus
Harvest21ABC317445748e-21112 - 1699756 / 58minusABC31744
Harvest35U35_463925583e-2515 - 7410060 / 60minus
Harvest35U35_391855728e-2139 - 969756 / 58minus
Harvest35U35_366195748e-21112 - 1699756 / 58minus



Contig Sequence (558 bp)

>U35_46392 558 Hv_44K_v2
TTTTTTTTTTTTTTTTTGACGCAACAAGAAACTGATGGTTCATTACAAGATAACTCATTC
ATCCGCTTACACATGGCTACTGACGGGGAAATTATAAGCTTAGTGGCAAAAGCCAACAAC
AGTATGAAAAAGAAGCACCGGTGCACAAAACCAACTACTCCCTCCTAGCCTCCAATTTCT
TCTTGATGAAAATGGCCTCCTACCCCAAGCATACTCAGCCATACATTGTCAGTGCGCCAC
ATCACCAGTGATCAGTTTTTCTTGTGGATTGTAGAAACTCATGTATGGAATCAAACCACG
AAGCTTTTCTCTCTTCTGCAGCATCTTCCACCGTAACGTCTTGAGGTTAATCTCGTAGAT
GTCAAGGCCCATGGTCACGAAAACGATATCACTGCCCCCCAGAGATCCAATCAATCTAAA
TCTTTTATTGGGAATTTGAATGGGGAGATGGTTATCAAGATCGATGACTGTACGCCTAGT
CCATGACCCAATTCCGTCAGAATCTCCCTGTCTTGACCACAAGTGGAGGGTTACCTTGTC
CACATGTGCAAACCCCAG



Homology of Contig U35_46392 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None