- Probe CUST_8165_PI390587928
- Source Contig U35_2669
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_8165_PI390587928 | Hv_44K_v2 | TGACTTTGTGATTATGCAACTTCTGCTGCGACTTCCTTCAGTTGACTACTGTTTCTTAAA | 657 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK250544.1 | 1700 | 2e-23 | 1635 - 1692 | 100 | 58 / 58 | plus | ABC06271 ABC06272 |
| MLOC | AK354858 | 1888 | 2e-23 | 1754 - 1811 | 100 | 58 / 58 | plus | ABC06271 ABC06272 |
| MLOC | MLOC_63119.1 | 5358 | 2e-23 | 5198 - 5255 | 100 | 58 / 58 | plus | ABC06271 ABC06272 ABC15209 |
| MLOC | MLOC_63118.10 | 1153 | 2e-23 | 993 - 1050 | 100 | 58 / 58 | plus | ABC06271 ABC06272 |
| MLOC | MLOC_63118.9 | 2030 | 2e-23 | 1870 - 1927 | 100 | 58 / 58 | plus | ABC06271 ABC06272 |
| JLOC1 | JLOC1_41333.6 | 2586 | 1e-23 | 2387 - 2444 | 100 | 58 / 58 | plus | |
| JLOC1 | JLOC1_41333.5 | 2006 | 1e-23 | 1807 - 1864 | 100 | 58 / 58 | plus | |
| JLOC1 | JLOC1_41333.4 | 1904 | 1e-23 | 1705 - 1762 | 100 | 58 / 58 | plus | |
| JLOC1 | JLOC1_41333.3 | 2915 | 1e-23 | 2716 - 2773 | 100 | 58 / 58 | plus | |
| JLOC1 | JLOC1_41333.2 | 2244 | 1e-23 | 2045 - 2102 | 100 | 58 / 58 | plus | |
| JLOC1 | JLOC1_41333.1 | 2579 | 1e-23 | 2380 - 2437 | 100 | 58 / 58 | plus | |
| Harvest21 | ABC06271 | 730 | 3e-25 | 657 - 716 | 100 | 60 / 60 | plus | ABC06271 |
| Harvest35 | U35_2669 | 731 | 3e-25 | 658 - 717 | 100 | 60 / 60 | plus |
Contig Sequence (731 bp)
>U35_2669 731 Hv_44K_v2 GTTCATGGCACGCTGTAACGATGCTGCAGCACAAAAGGCTACCAAAGAAGCTGCGGAGAA GGCTAAGATTCAGGCCGACAATATTGGGCACAAGCTTCTGTCTAAGATGGGCTGGAGGGA AGGTGAGGGTCTTGGCAGTGAGAGAAGTGGCCGTGCAGATCCCATTATGGCTGGAGATGT GAAGCAGGATCACCTTGGTGTTGGTGCTATCCAACCTGGTGAGGTGTCATCTGAAGATGA CATCTACGAGCAATACAAGAAGCGAATGATGCTAGGCTACCGCCATAGGCCAAACCCACT GAACAACCCAAGGAAACAATACTATTGATACAAGGGGAGGTCAGCCAAGGGGAGGGGGAG ACGTAAGAAAACCAATTTTGCTGCAATCTTTTGCTCACAGAACTAACTGCTGCTTTGGGA AATGACTAACAGTATTGAAAGCTTTGTTCATCAGCAGAGAAGCCCAGAAGTTGATTTATT CAGCAAGTAACTTGGAACGCCACAGCCATGGGGCTTCCTGGGGTTCTGCAGTAGCTTTGC CGTTTTAGTGTTTGTTTTTGTCGCGTTAAGTACTATGAGTGTGTCCTATGGTGGTGTTTT ATGCCAAAGTTGATGTTTTGAACCGTGATGTATTTCTGCCTCTGTTGGTGGACAATGTGA CTTTGTGATTATGCAACTTCTGCTGCGACTTCCTTCAGTTGACTACTGTTTCTTAAAAAA AAAAAAAAAAA
Homology of Contig U35_2669 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |