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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_8113_PI390587928Hv_44K_v2CATGCACAGTGCAACAACGTTCACAAAAGACATATCCACTCGATTACTGATTTCTTTTTT802GeneList: royalblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.8912.8460.6850.5921.0090.884
Raw 20.37833.0555.4747.5343.7033.145



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
JLOC1JLOC1_48617.19993e-24862 - 92010059 / 59plus
Harvest35U35_152308943e-25803 - 86210060 / 60plus



Contig Sequence (894 bp)

>U35_15230 894 Hv_44K_v2
GGAAGGCTATTTCGCCTTACACCGACCTCGCCATCGACTTACATACTTTTGCCGGCCGGA
GCCACACGACCACAAGGAAGGAGCGAGCTAGCTAGCACCCACAAACAGCACCTGCTGCCG
TCCCGATGGCGAGCACCAACATGGCGTCGGCCACCTCCAGATTCATGCTGGCGGCGGGCA
TCCCCAGCGGCGCCAACGGCGGCGTGAGCAGCCGTGTCAGCTTCCTCCCGTCCAACCGGC
TCGGCTTGAAGCTCGTGGCCCGGGCCGAGGAGCCGACTGCCGCCGCGCCGGCGGAACCAG
CACCGGCGGCGGACGAGAAACCGGAAGCCGCCGTGGCCACCAAAGAGCCCGCCAAAGCCA
AGCCGCCGCCGAGGGGACCCAAGAGGGGCACCAAGGTGAAGATTCTGAGGAGGGAGTCCT
ACTGGTACAACGGGACTGGATCCGTCGTCACGGTTGATCAGGATCCCAACACCCGTTACC
CGGTGGTGGTGCGTTTCGCCAAGGTGAACTACGCCGGCGTGTCGACCAACAACTACGCCC
TGGACGAGATCAAGGAGGTTGCTGCTTGAACGATCGAGGCTGCCGCGTGCCCAATCCAAT
GTTTGTATCAGTAGCTCGTCAAGTGGCGATGTGAATGTTAGCCTCACAAATCTTATGTGT
AATACCTCTGCGATTATATGTATTTGCCTGCTTCCTCATGGACCTAAAAAAAAAAAAAAA
AAAATCTCCTCTTGCTTAAAATGATCATTTTTGTACAAAAGATCGGTTGTTCATGTTACC
GAATGGCAACAGAGCAATACAGCATGCACAGTGCAACAACGTTCACAAAAGACATATCCA
CTCGATTACTGATTTCTTTTTTAAAAAAAAAAAAAAAANAAAAAAAAAAAAAAA



Homology of Contig U35_15230 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None