- Probe CUST_810_PI390587928
- Source Contig U35_46835
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_810_PI390587928 | Hv_44K_v2 | TCTACACATATCACACTTCTGACCGTCGTGCTAATTTTGGTGCTTTATTGGAGGTTTGGA | 283 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_80077.1 | 2355 | 2e-24 | 2009 - 2068 | 100 | 60 / 60 | plus | ABC18237 ABC47436 |
| MLOC | MLOC_80078.1 | 1478 | 2e-24 | 52 - 111 | 100 | 60 / 60 | minus | ABC47436 |
| MLOC | MLOC_80077.2 | 2182 | 2e-24 | 67 - 126 | 100 | 60 / 60 | minus | ABC18237 ABC47436 |
| MLOC | MLOC_80078.3 | 1655 | 2e-24 | 36 - 95 | 100 | 60 / 60 | minus | ABC18237 ABC47436 |
| MLOC | MLOC_80078.2 | 1678 | 2e-24 | 44 - 103 | 100 | 60 / 60 | minus | ABC18237 ABC47436 |
| JLOC1 | JLOC1_53328.18 | 2967 | 8e-25 | 2762 - 2821 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_53328.16 | 2242 | 8e-25 | 2037 - 2096 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_53328.15 | 3472 | 8e-25 | 3267 - 3326 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_53328.13 | 2231 | 8e-25 | 2026 - 2085 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_53328.10 | 3439 | 8e-25 | 3234 - 3293 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_53328.5 | 2859 | 8e-25 | 2654 - 2713 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_53328.4 | 2933 | 8e-25 | 2728 - 2787 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_53328.3 | 1729 | 8e-25 | 1524 - 1583 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_53328.2 | 1720 | 8e-25 | 1515 - 1574 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_53328.1 | 2942 | 8e-25 | 2737 - 2796 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC47436 | 543 | 3e-25 | 284 - 343 | 100 | 60 / 60 | minus | ABC47436 |
| Harvest35 | U35_46835 | 543 | 3e-25 | 284 - 343 | 100 | 60 / 60 | minus |
Contig Sequence (543 bp)
>U35_46835 543 Hv_44K_v2 TTTTTTTTTTTTTTTTTATTGATAGATTGGTATCACTGAGATAAGAAATTCTTCCATACA TCAAGTTAAATGTAGACAAGAGAAAAATGATATGAGAGACAAGCTCATCACTGCCCAATC CCAAACCTCAAATAGAGGGGGGCAGCCCGGTGCATGTAGCTCCCGCTTGTGCAGGGTCCG GGGAAGGGTCCGACCACTTTGGGTCTATTGTACGAAGCCTTTCCCTACATTTCTGTAAGA GGCTGTTTCCAGGACTTGAACAACGCCAGGGCTCTCCTTCAATTCCAAACCTCCAATAAA GCACCAAAATTAGCACGACGGTCAGAAGTGTGATATGTGTAGACACATAGATCCTACAAA TACTAAATGAATTGTGAAGGACGGAAGTTTGACCTGGACACATAATAGGCAAAATAACCA GTCAAAAACTTAGAAGCAATAAACTACAACATTAGATACACTCACGGGCTAGAACAATAC AAAGAGGAACTATCTCAGCATGCCCTAATTTCTATCATCTATTTGAAAGCATCAGACCAC AAG
Homology of Contig U35_46835 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |