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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_8024_PI390587928Hv_44K_v2CACCAATTTACAGTCCAATGAGACTGATGAACCCACAGGCAAGCTGAACAACAAGTTCTG260GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.3391.5751.4750.5610.3250.290
Raw 28.39446.64142.61926.1493.2253.867



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC245718053e-25486 - 54510060 / 60minusABC24571
Harvest35U35_126348053e-25261 - 32010060 / 60plus



Contig Sequence (805 bp)

>U35_12634 805 Hv_44K_v2
GTCCCGAGCGTTAAGATCCTCAGCTTAAGAGTGTGCTTTGGTGTGCGCAACGATGCTAAG
ATGCTGCCGAGCTTCCTCAGATGCTTTCCAAACGTCGAGAGGCTACATCTCGAGGTGAGA
GCGAGACCCCCTCACTTATCTAGCATCACCCCTGTATCTGTATCTGTATCTGTATCTGTA
TCTGTATCTGTATCTGTATCTGTATGTGTTGCCGTCTCGCTGATGCATCATTGTGGAGCT
GAAGAATTATTTACCGATTTCACCAATTTACAGTCCAATGAGACTGATGAACCCACAGGC
AAGCTGAACAACAAGTTCTGGCACGAGGCTGGTACCATCGAATGCATCCAGTCACACCTT
AAGCTGATGGTCTTCTACGCCTTCCGAGGGGAGCGGGGCGAGCTCTCCTTCCTCAAGTTC
GTCCTGGAGAGCGCTCGGGTGCTGACGAAGCTGGTGATTGTTCTGCAAAGGGAGCTTCAC
TTCGATGGACGAGGCCAACTCCAAAGTGAAACCTCTGTTCGACGCAAGATGGGCTAGCCG
AGACTGTTCGCTGGTGCTGTTCGAGAGCCCACTCGTAACGGGAGATGACAAGTGGTTGCT
CAACTTGGAGAGAGGCTCTGATTTCTCTACCACGGACCCGTTCGCGAGCAGTGCTGCTCT
TCAGGGCTGCATCGTCTGAGGAGGTTCGTGTTAACTGAAACTTGGAGAGAGGTTTTGGAT
TTCTGTACCAGGGGCCCTTTTGAGTTCATCATCAGACGAAGCCTATAAGTGATAATTTAC
ATATGAGCAAAAAAAAAAAAAAAAA



Homology of Contig U35_12634 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None