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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_8017_PI390587928Hv_44K_v2GTAGTGGATGCAATGTGCTACGTAGTGTACAAGTGTACATATATGCCTAGAGTAACGATA933GeneList: thistle1
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 12.9356.7041.6350.8440.7280.648
Raw 119.987104.21220.71617.2393.2343.302



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_2461210313e-25934 - 99310060 / 60plus



Contig Sequence (1031 bp)

>U35_24612 1031 Hv_44K_v2
GTAGCCTTTGTCCTTACATGGCCAGGACCAGCCGCAGCAGAAGCCCTCGCTCTCCTTGCT
TCCTGCTGAGACGAATTAACCACCAGATCGCCTCGCCGCCGCTCCCCTTCCTGTCCTGTC
CTGCCACTGCCCGCCCATCCATTAGCGAGCTGAGCTGAGCTGATGGATCACCGGAAGCAG
CGGAGCCCCAGCCCCCGGAGCGGCGGCAGCTCGGGCAAGCACGGCGGCAAGGGGCCGGGC
AGCAAGTCGGGCGCCGGGGGCAGCAAGAAGCCGATCAAGGTGGTGTACATCTCCAACCCC
ATGCGGGTCAAGACCAGCGCGGCGGGCTTCCGCGCCCTCGTCCAGGAGCTCACGGGCCGC
CATGCCGACCCCTCCAAGTACAACACCGACGACGGCGGCGCGGCGCAGGACCTCAGCCTC
AGCCCCAGCCCCGAGGGGAGCGCGGCTGGGTCGACGCCTGACGCGGCCGTCCCCGGCGGC
CCCGCCGCCGCTGGAGGCCAGCCGGAGCTCACCGCGGCGCCGTTCGGCGACGGCGAGGAC
GAGGAGAACATCTTCGGATCGCAGCTGCTGGACAACGACTACAACGACTACGCCGTCTTC
TCGCCGGAGACGCCCCTCTACGACTTCCCGCACAGCAACAAGGTGTAGTGACCAGTCACC
CGATCCCTCCCGCACGCTAGCTGCATGTTAGCTGACGGCCTGACGCGTGTGCCCCCCGCT
CCTTATTTGCATGTCATTTGAGGATTTCGCTGTATTGCATGTGTGTGCCGCTATGATTTG
TGCTTGTGCGTGCGTATGATCCACCATCTGCTAGCCCCAATTTAACCCGTCGCATACCCA
TGATCGGCCTCATAATTCCCCTATACACATATCTATTTCGGGTCTCCGTGTTCCTCTTTC
CCCTTCTCTCTTCTCTTGTGTGTGGAGAAGGCTGTAGTGGATGCAATGTGCTACGTAGTG
TACAAGTGTACATATATGCCTAGAGTAACGATAGCGGCCGCTCGAGCATTATCGAGTGGG
CCCAATTCGCC



Homology of Contig U35_24612 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None