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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_7818_PI390587928Hv_44K_v2GTGCCTGTACACGGTGGAGGCGGAGGAGTCATCGCAAGAGCGTGGCCTTGGCGCGGGCGC435GeneList: darkolivegreen
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.3210.4710.8001.2641.4531.800
Raw 29.13268.084101.642244.31098.906136.977



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK3565936512e-24414 - 47310060 / 60plus None
Harvest21ABC301454953e-25436 - 49510060 / 60plus
Harvest35U35_302984953e-25436 - 49510060 / 60plus



Contig Sequence (495 bp)

>U35_30298 495 Hv_44K_v2
GCCAGGGATAGCGATTCCCAGCCAGCATCCATCCCCAATCCCCACGACCAACGCGGGCGG
CGACTGCCATGGCCGGTCGGCCGTTTCTCCGGCAATTCGTGGAGAGACCACGACCCGGGC
GGAGCGCCGTCGAGCCTCGCGTTGGGAGGCAGGAGAAGGTTGCGCCAGACGACTCCGGGG
AGGGCGTGTCGGCCCGATTGGGCACAGGCGAAGACGCCCACAGCCGGCCGACCGCACCAC
CGGCGGCAAGAGGATCTCCCATCGCGCTCGTCCTCGGAGTAGGAGCCATCGTGGAGGTGG
GTGCCGGGCGCGACGCCGTTGGAGGCGCCATTCACGAGTCCGAGTGCCTCTGGGTTCCAT
GTGCCAAATCGGCCGGAGCGGCTGCCCGACGGCGGGCTCGCCAACGGGAGGCCGAGGGAC
ACGAGGCAGCGGCGAGTGCCTGTACACGGTGGAGGCGGAGGAGTCATCGCAAGAGCGTGG
CCTTGGCGCGGGCGC



Homology of Contig U35_30298 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None