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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_7762_PI390587928Hv_44K_v2CGAAACAGTGTGCTGTTTTGGTCTCTTTTAGAGCTGGTTGTATCTATATGCTATATATAA750GeneList: midnightblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0100.0160.4471.6071.9182.601
Raw 79.170405.17312280.26764284.70029008.13342858.700



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_57981.110113e-21950 - 10079857 / 58plus ABC03316
JLOC1JLOC1_37641.19202e-21826 - 8839857 / 58plus
Harvest21ABC033168453e-25751 - 81010060 / 60plusABC03316
Harvest21ABC033175696e-2248 - 1059857 / 58minus
Harvest35U35_12298453e-25751 - 81010060 / 60plus



Contig Sequence (845 bp)

>U35_1229 845 Hv_44K_v2
GCACCGAAGCACACCCTAGCTTGCAGTCTCACTTGACCTCGAGGACACTCCAGCAGAGGT
TTCAGTCATGGGTAGCCGCCGTGCAGGCCTCCTCCTCCTCTCCCTTATTCTGGCCAGCAC
CGCCCTCTCGCGCAGCGCCGATCCGCCGCCGGTGCACGACACGGACGGCCACGAGCTGCG
CGCCGACGCCAACTACTACGTCCTCTCGGCCAACCGCGCCCACGGCGGGGGGCTGACGAT
GGCGCCCGGCCACGGGCGCCACTGCCCGCTCTTCGTGTCGCAGGACCCCAACGGGCAGCA
CGACGGGTTCCCCGTGCGCATCACCCCGTACGGCGTCGCGCCGTCCGACAAGATCATCCG
GCTGTCGACCGACGTCCGCATCTCCTTCCGCGCCTACACGACGTGTCTGCAGTCCACTGA
GTGGCACATCGACAGCGAGCTGGCGGCGGGCCGCCGGCACGTGATCACCGGCCCGGTCAA
GGACCCGAGCCCGAGCGGCAGGGAGAACGCCTTCCGCATCGAGAAGTACAGCGGCGCCGA
GGTGCACGAGTACAAGCTGATGTCGTGCGGGGACTGGTGCCAGGACCTCGGCGTGTTCAG
GGACCTCAAGGGTGGGGCGTGGTTCTTGGGCGCCACCGAGCCATACCATGTCGTCGTGTT
CAAGAAGGCGCCGCCCGCTTAAGGTCCAATGATCCATCCGTCAAGGGCGTGCGCCCGTAG
TGTGCATGTGTACATTTGAATAAGGCTGGCCGAAACAGTGTGCTGTTTTGGTCTCTTTTA
GAGCTGGTTGTATCTATATGCTATATATAAAAAAGAAAAATCTAACCTAAAAAAAAAAAA
AAAAA



Homology of Contig U35_1229 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os04g44470.12015e-68protein|KUN1 - Kunitz-type trypsin inhibitor precursor, expressed
Brachypodium v1_2Bradi5g16290.12372e-66
Arabidopsis v10None