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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_7512_PI390587928Hv_44K_v2AGAGAACTTGAAACTTCTGTGAAGAAACAAAAGATGACCATTGATGCAGGTCCGGGCACA592GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_29380.13892e-24150 - 20910060 / 60plus ABC17168 ABC45971
MLOCMLOC_25093.14373e-21370 - 4299758 / 60minus ABC45971
JLOC1JLOC1_19569.13908e-25150 - 20910060 / 60plus
Harvest21ABC171687113e-25637 - 69610060 / 60plusABC17168
Harvest21ABC182037286e-22618 - 6779758 / 60plus
Harvest35U35_89636673e-25593 - 65210060 / 60plus
Harvest35U35_230347286e-22618 - 6779758 / 60plus



Contig Sequence (667 bp)

>U35_8963 667 Hv_44K_v2
GTTACACAGTGCCCAAACTGTGACTACTACCCGGACAGTCCGTCAGTCCCCAAACCATCA
CCTCACTCCATTCTCCTCTGCTCTTCGCTCCCTGCCCCCGCCACACTCCGTACCGTCGGA
GGAACAAGGGATATTGTCATGGTTCAGGCTTGTGCTTTCTCCGGCGGTGGTTCGTTCGTT
GCTTGGCTCGTCGGCTCCGGCCTGTGTGCCGGCGATTCTGTTATTCGCTACCGCTGTCAG
GTCAAAGTCGTGGATCCGTGTTAGTTCATTCACGCCAAGAATGAATGATGACCAAAACCA
AGATACTTATTGGGCTAGAATTTCAGAGTACTACAACAGACAGAAGGAATCATCATGGCC
GGAGCAAAATGATAATGCAATCAATTGCCGTTACACATTCATTAACAGAGAGACCTCTAA
ATTTTGTGGTTGCCTTCAGCAGATTTTAAATAGGCAAGAAAGTGGAAGGACTATAGAAGA
AAAGACAAACGATGCACACATTATGTTCAAGGAAATTGATCCTACAAATAAGAAGCCTTT
CACATTGATGCATTGCTACATAGAGTTTTCGAAGTATCCAAAGTGGCAGACAAGAGAACT
TGAAACTTCTGTGAAGAAACAAAAGATGACCATTGATGCAGGTCCGGGCACAGCCACCAA
TGATCCG



Homology of Contig U35_8963 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None