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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_7306_PI390587928Hv_44K_v2GTTTCGATATCTGTACACGCTAAACATATTTCTTGTTGTTTTGTGCAGATGAGACGAGTT347GeneList: yellowgreen
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.6562.8552.0871.2070.3450.393
Raw 22.261149.23789.34483.5088.28710.105



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_77370.17582e-24197 - 25610060 / 60minus ABC01988 ABC34765
Harvest35U35_146697843e-25348 - 40710060 / 60plus



Contig Sequence (784 bp)

>U35_14669 784 Hv_44K_v2
CATTAACACACCGGTTTATTTGATGTGCAGGGGACAATGACTTCCTTAAACCCCATGGTG
AACAGCTCATAGAGTCATTTGTGGATCCATTCATCATACGTCACCCAAAGGGCCACACGG
TCCCAAGGCTTGTTGGTAAGCTCATATTTCAGTACACTAAGCTCCTCTGAACTGCATAAA
TTCAGGCACTGAATACCGATCCAGTTGTAGTGCTAATTTTGATATTTAAAAGTTCAAGCG
ATCAGTAGGGTAAACTGTAAACATGAGATATTTGTGATTGGCGGCCAAAGGACCACAAAC
TTTATCTGCAAAATAAACTTCAGTATTCTCTGTTGATCTTATTCAGGGTTTCGATATCTG
TACACGCTAAACATATTTCTTGTTGTTTTGTGCAGATGAGACGAGTTTGGAAGTCATGTC
CCGTTTCCTTGACAAGATGGAAAAGGAGATATCTGAACTTCCATCCGCCGAGCCCAAGGC
CGAAGCACCCGCTGATGTTGACGAAAAAGAAATTTGCATCTGATATAGCACCGTGCCTGA
ATACATAATCAAGTCCTTATATAGGCAAATCATACAGTTGTGACCTCCTTAGTTTCGTGT
TGTTGCAAGTGTGTGATTATTCAATAATAATTCCTGAATGCAGAGTGATAGCTATCGTGT
ACTTCCTCCGTTCCTAAATATAAGTCTTTCTAGAGATTCCACTAGTGGATTACATACGGA
TGTATATAGACATACTTTAATGTATATATTCACTCATTTTGCTTCGTAAAAAAAAAAAAA
AAAA



Homology of Contig U35_14669 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None