- Probe CUST_7262_PI390587928
- Source Contig U35_26654
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_7262_PI390587928 | Hv_44K_v2 | TGTGTTTAAAACTGTGGGCTGGGTCCCATTTCATGTATGCCTAATGCAATAAGTTGGGCC | 144 | GeneList: lightgreen MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 0.111 | 0.175 | 0.734 | 3.441 | 5.579 | 11.386 |
| Raw | 82.527 | 198.044 | 720.252 | 4994.547 | 2930.963 | 6640.087 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest21 | ABC24511 | 285 | 3e-25 | 82 - 141 | 100 | 60 / 60 | minus | ABC24511 |
| Harvest35 | U35_26654 | 285 | 3e-25 | 145 - 204 | 100 | 60 / 60 | plus |
Contig Sequence (285 bp)
>U35_26654 285 Hv_44K_v2 GGAGGGGAACCTTCCCAAAAAGGCTATCCCCCCCTGTTTTGACGGTAGCCTGTTTGAGTT CATCCCCCCCAAAAGGAGGCAGGCGCCCGGGAAACAGTATTAGCCTGGGTGCAACCCTGT GGGCCCGGCCGGAATGCATGTTTTTGTGTTTAAAACTGTGGGCTGGGTCCCATTTCATGT ATGCCTAATGCAATAAGTTGGGCCCCCCCCAAAGTTTCATCAGAACAAAAAACATGGTGG TTTTCAAAAAAAATTTTGTTTTTTTTTTAAAAAAAAAAAAAAAAA
Homology of Contig U35_26654 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |