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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_7257_PI390587928Hv_44K_v2CAGTAAGCAGGCGCAACTGTAAACCTTTAACAGCAAGCAATATCATATTATTAATTAGAG631GeneList: black
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.3020.1830.3332.1112.5123.085
Raw 6.7442.67110.896101.97044.50859.812



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_81534.130352e-242959 - 301810060 / 60plus None
Harvest35U35_266587073e-25632 - 69110060 / 60plus



Contig Sequence (707 bp)

>U35_26658 707 Hv_44K_v2
GAGGACATCTCGCTGGCATACCTGTCACTGTTGTGCAGCTGCTGCGTGTTCGGGTGGAAC
GCCGGGCGCCTCGGGTTCGGCAACGCGTACGTGCACGCGGCGACCTTCGTCCTGCTGTGC
CTGGCGCCATTCTTCATCTTCACCCTGGCGGCCATCAACATCGACGACGAGGCGGCCAGG
CTCGCGCTAAGCCTCGGCGGCACCCTGCTCTGCGTCCTCGGCCTGCTGTACGGCGGGTTC
TGGAGGATCCAGATGCGCCGGAGGTTCGGGCTTCCCGGAAACGCCTTGTGCTGCGGGAAG
CCGGACGTGACGGACTGCTTCCAGTGGCTGTGCTGCTGCCCCTGCTCCCTCGCCCAGGAG
GTCAGGACCGCCGACGCCTACGACATTGTGCACCACAGGATGGTGTGCCGCCGCAGACCC
GGAGACGGCGACCACCAAGAAGAAGAAGAAGAAGATGATGATGATGATGATGATGGCAGC
GGAAGCAGCAGCTCCCGGGTGCAGATGCAGCAGCCACTGAGGTTTGCAGGTGTTTTTGCT
TCAGAATCAGATACAAATACAGTACCCCCTGCTGTGCCTGTTGCTGTTGGCATACAGATA
CAAATACAGATTCAGAAACACTAAGTTAGATCAGTAAGCAGGCGCAACTGTAAACCTTTA
ACAGCAAGCAATATCATATTATTAATTAGAGTATAGTAAAAAAAAAA



Homology of Contig U35_26658 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi2g62747.14491e-56
Arabidopsis v10None