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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_7121_PI390587928Hv_44K_v2ATGCATGAATCTTTGTGCTCAGTCGGGCTACAACTAATTTTTGATTGTTTCATCTTATTC977GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.1171.1601.3300.9160.3670.365
Raw 285.956459.911471.203522.61971.77377.978



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC1940711113e-2575 - 13410060 / 60minusABC19407
Harvest35U35_1046211113e-25978 - 103710060 / 60plus



Contig Sequence (1111 bp)

>U35_10462 1111 Hv_44K_v2
CAAAAACCCTAGCCGCCCCACCCACATCGCCGCCCGCCGCCGCTCGTCAGACCTCGCCGC
CGCGGACCTCTCTCCCATCCCCCTCGTCATCCCCACCGACAGGTCCAGCCACCGCCGTGC
CCGGCCTCGCGCCTCAGGACCCCGCTCCCTCCCGCTGCCTCGTCCGCCTTCCACACGCGT
CCGCGTCCTGCATCATCCCCACCCGTTCGGTCCCGCGTCTCGGGAGGTCCGACTACGTCG
CGGCCATGGCCACTCAGCAGTGGTGGCGGCAGGAGGGGAACGGCGGCCCGTTGGAACCAG
AGGATCGGCGCCGAGGGCCTGCCGCGCGGGGTCGTCGAGACCGGCTCCGCTCCGAGACTC
CACCACCAAGCACGCCGACACCAAGTGTGACGGTCACATCGCACTCTGCAATCCACTCAA
TTAATTGAATAACCCGCCGATGACAGCCACTATGAGAAGTTTCTTACATGCCGAAGTTAT
TTTCGATACCGATGGCACATTCAACAAAGGAAGGAGATGAGGGAGAAAGAGAGAGCAAAG
AGGAGAGGGAGGTGCAGCGACGGATGCATGTTCCTCGTGAGCTCCTTCCATTCCTTCGCT
TCCCTCTGTGTACTTTTGATTTGGTTGTGAGATTGTACTCCATGGTGCTTGTCGGTCCGT
GTGCAATTTATTTCGTCTCAACCAAGCATAACATGAGGTGCGAATTTTTGCTAGGAACTG
TATTACAACAGATCATTGGCATTGCAGCTTCAGTGGACATGTATGCTGAATATCCCCTCA
CTGGACAAGATTGGATTTTAGTGTGTACAAGCCCTCCTCTGAGCTGCTCAGTACCAAAAC
CCAAGTTGGTACAACACCACTTTGTAGTTTTGTACCAGAACCCAGGTCCGGATTCACCGA
GAAGTACAACTGAAGACGCTGTCGGCTGCGTGCTGGTCTGGAAACTACACAATATCTTTG
GAACCCACTATTCTCTAATGCATGAATCTTTGTGCTCAGTCGGGCTACAACTAATTTTTG
ATTGTTTCATCTTATTCTATAATGCAAACAACCTGTTTTTTCATCGCGAGAAAGAACATT
AAGAAAATTTTGCTAAAAAAAAAAAAAAAAA



Homology of Contig U35_10462 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None