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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_70_PI390587928Hv_44K_v2GACGATTCAGCTCTTCATTGGTGATATATGTGACTTTGAATTCCTTTCAGAAGCTTTTAA691GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK249402.119502e-24704 - 76310060 / 60plus ABC12759 ABC12760
MLOCMLOC_17902.224322e-241064 - 112310060 / 60plus ABC12759 ABC12760
MLOCMLOC_17902.134152e-242057 - 211610060 / 60plus ABC12759 ABC12760
JLOC1JLOC1_12370.120398e-25650 - 70910060 / 60plus
Harvest21ABC179987613e-25692 - 75110060 / 60plus
Harvest35U35_78017613e-25692 - 75110060 / 60plus



Contig Sequence (761 bp)

>U35_7801 761 Hv_44K_v2
GCTGCTTGCCATTGCTATCCAATCCCGCTCTTTGTTTCCTTCGCCACTCTCTCTCTCCCC
CTCTCTCTGCCTCGCCCTCCTTCCTCCTCCCCGTCTAACGGCACGGGCAGAGGCGGCTGC
TCGCTCGGGTGTCGGCGCCTCAGCCCCGGAGCAGGGCCGGGCGACACGGCCGCAGCGGCA
GATTCCTCGAGCAGTCTGGGTATCTCAATTATTACAGTGGACAATAAAGGATTGTGAGAA
TGGCAAATTTGGTCACCAACTGCGGTTTCAGTCCATCTCCTGCTGTTAAGGCACACTGCA
ACTCACCAAGTTATGGCCACAATTTCATCCGATTACAAAATTCAAAATCTTCAACTTCAA
GTCTGAACCTCAAATCATCTTCCAAGAGGTCAAATAAGTTATATGTTACTTGTGCTAGTA
CTTCTGTACAAGGACAGACACAAACACCTCTTACTGGTAGTCAGCAAGCATCTGGGCATT
CATCCTCTAAACCTAAAAAAGTTATGGTTATTGGTGGAGATGGATACTGTGGCTGGGCAA
CTGCTCTTCATCTGTCCAACAAAGGTTACGAGGTTGCTATTGTTGATAATCTTGTTCGAC
GCCTTTTTGACCATCAACTTGGCCTTGATTCGCTTACGCCCATAGCTTCTATCCAAAATC
GCATTCGCCGATGGAAATCTCTTACAGGGAAGACGATTCAGCTCTTCATTGGTGATATAT
GTGACTTTGAATTCCTTTCAGAAGCTTTTAAGTCTTTTGAG



Homology of Contig U35_7801 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os05g32140.14809e-82protein|NAD dependent epimerase/dehydratase family protein, putative, expressed
Brachypodium v1_2Bradi3g34340.14844e-86
Arabidopsis v10None