barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_7088_PI390587928Hv_44K_v2ATTGCTGATGGAAAAGCAGCAGTGTAAACTATCTGTTAATCACATCAAACTTGTAAATCG409GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_58430.620292e-241876 - 193510060 / 60plus ABC20947
MLOCMLOC_58430.222072e-24118 - 17710060 / 60minus ABC20947
MLOCMLOC_58430.720212e-2468 - 12710060 / 60minus ABC20947
MLOCMLOC_58430.122812e-24120 - 17910060 / 60minus ABC20947
MLOCMLOC_58430.324932e-24118 - 17710060 / 60minus ABC20947
MLOCMLOC_58430.426852e-24118 - 17710060 / 60minus ABC20947
MLOCMLOC_58430.523842e-24116 - 17510060 / 60minus ABC20947
JLOC1JLOC1_37958.224528e-252315 - 237410060 / 60plus
JLOC1JLOC1_37958.120048e-251867 - 192610060 / 60plus
Harvest21ABC526314443e-25278 - 33710060 / 60plus
Harvest35U35_104785803e-25410 - 46910060 / 60plus



Contig Sequence (580 bp)

>U35_10478 580 Hv_44K_v2
CAAAGACTTTCTGAGATCCTCAGTTCCTGTAGCTTTACCTGGCAAGGAGGTTTCCAAGTT
CTGGGGGCCTCAAGAATATGACGACGAAGACTAGCGTAAATTATTAGCAAAAAGATGCAA
GACATGCTGCAGTTTATCAGGGATTCAGTCTATCCCTGTCCTCAAGGAATGTATTAATGT
GGAGCAGTTCATTCCTTATCCATTCTCTTCTTGCATATGGAACATAAATGATCTCTGGAG
AGGCTTGATGGCCTCAGGTGTTGTGATCAATGATTAAGAGAAAAACAAGTTGAATGTTTA
GTAGTTCCACAGATCAGAAAATGGTTTTGGAGAAGCCTATCAAGCTGAAGAACTGTGGTG
CATGATGTGGAAGTTTGAGTGCACTATTATTTCCCTGTTATGGCCAACTATTGCTGATGG
AAAAGCAGCAGTGTAAACTATCTGTTAATCACATCAAACTTGTAAATCGAATAGTTTAAT
ATGTACATATTTTAGTTTTTTGTATCACCACAGGTTTTATGTACATATTGCACCACCACA
GTTTTTTTGTATCCAAATTCATCAAAAAAAAAAAAAAAAA



Homology of Contig U35_10478 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None