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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_7076_PI390587928Hv_44K_v2AGAAGCTTTCCAACCACTAGAAACATTCTGTAGTACCCTCTCCGTTCCTAAATATAAGTC1019GeneList: lightyellow
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.3770.2590.9282.0601.2651.045
Raw 113.004111.858380.5841288.345290.406256.179



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC1144811103e-251020 - 107910060 / 60plusABC11448
Harvest35U35_1980011103e-251020 - 107910060 / 60plus



Contig Sequence (1110 bp)

>U35_19800 1110 Hv_44K_v2
GGTGCAACCAGCGGAGGCAGGATCAGCCAAGAAATGTGTGGGGGAGCCATCCTCGCCAAC
CTCACCCCCGACCGGGTGCGCCGGCGGCTGACGGCAGCCCAGCTCTGGCCGGACGCGTAC
TTCCCGGCGGAGAGGGCGGCCTCCGGCAGGAGGAGGAGGAGGAGGAGGGACGCTGCCACG
ACCGACGACGATTTCGAGGCAGAGTTCCAGGTTTTTGAGGAGGAGGAGGACGACAGCGAC
GACGACTATGAGGCTCCTCCGGCGGCGGCTTCTCCAGCAGTTGCTTTGGGCTCCAGTCGG
CGCTGCGTAGCCGGTGCCAAGAGCACCAACTACATACGCGTACGCCACCGGACGTCGGGC
AGACGGGCGGCAGAAGACACCCGGCAGCGGTGGCGCGTGTGGCTCGGCACGTACGGTGGT
GACGCCGAGGAGGCCGCTCCAGCGTACGACCGCGAAGCCCGCCGGGTGCGCGGGAAGAGC
GCTAGGCTCGACGACTCCCCGAACGAAGGCTGTCCTCGCCGGAGAAACCTGCCGGGGACC
ATCGACCTCAACCAGCCGCCCGCCGTTTCCGGTGACCACATGGTCAGCGCCGATGCCGAC
GCGTGCAAGGCGAAGATCATGCAGCTGGTCGCGGAGGGCCCTCGCGACGGGCGGATGGCG
GGCCTCGCGTCTGAGCTGATGGACGGGGCGCGCCATGGGAGCGAAACCAGAGTGTCCGTG
GTGATGCGGTGTGCGGCGTTGATCTCCAGATGCAGCCGCGAGATGGAAGAGGTTGCTGCG
CTCCGGAGGGGCCTCGAGAACCGCGCGAGGCGGCTGGATGAGCTGAAAGATCAACTCGTT
AGGATAGCTTCCCTTCTGGGCTCTGAATTCTGATTGACTGATATCATCGGGCATGTTTGA
GCCTGTTTCTTCGTGGAACTCTGCTCTGACTGTATGAACACACATGGACCGTATGAACAG
TGATCTCGGAAAAATGGTAGTGGGAGTTTTTAAAAAAAAAAAAAAAAATTAGCTGAATGA
GAAGCTTTCCAACCACTAGAAACATTCTGTAGTACCCTCTCCGTTCCTAAATATAAGTCT
TTTTAAAGATTTTAAAAAAAAAAAAAAAAA



Homology of Contig U35_19800 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None