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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_7070_PI390587928Hv_44K_v2TGCCCAGGGGAAAAGAAGAAGCAAAATGTTAGTTTGGTGAAATCTTCTGGTGATATAAAA750GeneList: yellow
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.0531.8411.1390.9070.4560.500
Raw 328.755467.888251.526306.51656.48565.670



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_20816.223532e-242284 - 234310060 / 60plus ABC12333
MLOCMLOC_20816.324702e-242401 - 246010060 / 60plus ABC12333
JLOC1JLOC1_14430.225778e-252396 - 245510060 / 60plus
JLOC1JLOC1_14430.123888e-252207 - 226610060 / 60plus
Harvest21ABC123338393e-2530 - 8910060 / 60minusABC12333
Harvest35U35_198068433e-25751 - 81010060 / 60plus



Contig Sequence (843 bp)

>U35_19806 843 Hv_44K_v2
TGCTGATTACAGCAGTGATAGTGACCATGGCAGGGACAGCAGACGAAGCTCCTCAGATTA
CACACATGAGACAAACTATCCTGTTTCACCTAGAGATCTCAGTCTCCGTCTCCACAAGGT
GATCCAGCATAGGCTAGAAGACCGAATCAAGGAGCTTGAGACAGCACTTGCTCAGAGCCA
GAAGCAGGCGCAACTGCACATCATGGCGAGACAGCGAGTCTTCTCTGAGCGGACGTGCTC
AAACAGTGATTCAGGTTCGTCCTCCAACCAGGATAGCCCATTGTTTATACAAGAAGCTAG
CTCCTCCGCCGAACCGTTCTGTCTAAATCTAGCTGGAGATGCACTAGAAGCCTACGATGA
AGCCTATGAAGAATTCATGAGGATTGCTGACTCCCCTTGCACCACAAGTACAAACGGGAG
GCCTCAAGTAAATGAAGATTATTCAGTTGACCGCAGCTTGATCTGGGGCTTGGAAGATGA
GAGCGCTACAGAGCTGAAAGAGGACAGCACTTGGGAGCAGGCTGTGAACATTGGGGACCC
TAACAGAGCTCAAGAGAGCGATGGAGACGAGTCGGGTGACGAGGATGACCACGATAGTGA
GATGCTCATCCAACAGATTGTAGAGAGAACTAAGCAAGGCTCACCTGTACTCATACATGC
TCAAAGAATGTTGTTTTCTGTGGATGATTAGGTTGCAGGACTATATTATATACCGTTGAA
ATTTTGATATAGCATGTAGTGTTGATTAATTGCCCAGGGGAAAAGAAGAAGCAAAATGTT
AGTTTGGTGAAATCTTCTGGTGATATAAAATACTTTTTTGCCAAAAAAAAAAAAAAAAAA
AAA



Homology of Contig U35_19806 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os12g38730.26334e-72protein|expressed protein
Brachypodium v1_2Bradi4g03800.16333e-85
Arabidopsis v10None