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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_6987_PI390587928Hv_44K_v2AAGAAATCCTCTTAGAAGAAGGCCCGTGATTAATACCAGTGACCAACTAACTAAGTAAAA723GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.4211.4261.0940.8880.5050.704
Raw 70.350110.54873.47997.35718.09627.795



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC501887383e-254 - 6310060 / 60minus
Harvest35U35_125097863e-25724 - 78310060 / 60plus



Contig Sequence (786 bp)

>U35_12509 786 Hv_44K_v2
GACCCAATACTTGAAAAGGAATTCAAAACCTTTCTATTGGCCAACAGAGACCATTGGAGA
GGAGCAGGCAAATACAATCTAATTCCACAGCGTACCAAACATTTTACAAGCAGGACAAGA
ATTCCATAACACATGTGTCACTGTTAAGGGGCTTCTTTGTACGGCAAAAGTAAATGCGAA
CACATGTGATTGTGAGAATTGCAGTAGGCAGAGGAGAAACTAAATATTGCCGCTTCTCCA
TGCTGCCCAAGATGTTTTCACACCTCTGAAGATGCTGAACAACTCCTCATCAGTTGCCAC
AAGGCCACTCGGATTTGGCATCACCTCGGGATCACTCCTTCTGACTGCTTCCAGGATCTA
TGGTGTACTGTACTCCCATCCCAGCTCACCTCAATAACTGTGCGTGGCCAGAAGTGGTGC
TTTCCATCCTTTGGAAGAAAATATGGAAATCAGAGGAATGTAACTGCCTTCAGAAACGAA
GACCACTCCTCTGCTACTACTATTGGGAACATTTGTTCTGACTTTGAATTGTGGCCTTTT
AGGTTTAAAGATCTGGTTAGTAATTCAGCCGCCTTATCTTGGCGCGACTACCTCCCCTTA
TGGCTTGCAGTGCCTCTGTAACTCTTAGCCCTCTGGCTACTTTTTAATCCTCTCCCTCGT
GATTTCTTCAACAACAACAAAAAAAAGACAGTAGGCAGAGGAACTGGGATTTTCTTTCTA
TGTAAGAAATCCTCTTAGAAGAAGGCCCGTGATTAATACCAGTGACCAACTAACTAAGTA
AAATAG



Homology of Contig U35_12509 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None