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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_6963_PI390587928Hv_44K_v2ATGTCGCAGAGTTTGAGATCCAATGGGAAGAAATTGTTCACCTTGAGCATCAAGAGGCAC524GeneList: darkslateblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.3483.0061.8300.6060.6520.615
Raw 18.08757.48233.21716.6505.3156.683



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_245058343e-25525 - 58410060 / 60plus



Contig Sequence (834 bp)

>U35_24505 834 Hv_44K_v2
GCCTAAACCTGTCCAAGGAATGGGTATTTATCACCCCTCAAATTTCCACGATAACATTAA
TCCATCTTTACCTCTGTATGAATCATCTGCACATGCCCGGGAATACCCATTTCAACTTAT
AAAGCAAATGCCTGTTACAGCTGCTGCAGTTGCAACTGCTGCAGTGGTTGCATCTTCAAT
GGTTGTTGCTGCAGCTAAATCTAACAGTGATATTAAACTAGATGTGCCTGTTGCTGCTGC
TGCCACTGCTGCTGCTGTTGTTGCTACATCCGCTGCTGTTAAGCAATATGAATACATGGA
TCCAGGTTGTCAATTGATTACCTTGCCTAGTTCTTCAGAGACAAGTGCACCAGTCCATAG
AGTTGGACCTGACTTCTGGGATAAAGATCAGCTGGAAGTTGTTCATGGACAAGAAAATGC
TCTCGAGCAAGGAAATGTTTTGGTTGAAGTGCCTCGGGAAGCTGAAAGGATATCTGACAA
GTCAATCGGGACAGAGAGTGTAAGATCTGATGTGACTATGGACGATGTCGCAGAGTTTGA
GATCCAATGGGAAGAAATTGTTCACCTTGAGCATCAAGAGGCACCGTCGCCAGGGCCTTG
TGTATATCACACTATGGCAAATTTGTCCGAATTGGCAGTTAGATTTCCAAAGAGAAATCT
GCTGTTTGTGCTAAAACCACTATTCTTTACAGCAGCAGTGTTGACGCTTTTTTTCTTCTT
TTTTTCTTTTTGCTGTAACAAGTGTACAAAAATGTCCCATAGAGTAGGGTGCTAATTGAC
AATTTGGTGCAAAATGAACTGTATGCATTTACCCCTGAAAAAAAAAAAAAAAAA



Homology of Contig U35_24505 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi1g45040.28323e-63
Arabidopsis v10None