barSeed
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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_6908_PI390587928Hv_44K_v2AGGCCCGCTACTTCCACCTCCTCCCGGACAGCGACTGGGAGGCGGACCTCGACGCCGTGG497GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_76303.316552e-24520 - 57910060 / 60plus None
MLOCMLOC_76303.517502e-24499 - 55810060 / 60plus None
MLOCMLOC_76303.49822e-24514 - 57310060 / 60plus None
MLOCMLOC_76303.117762e-24634 - 69310060 / 60plus None
MLOCMLOC_76303.217162e-24634 - 69310060 / 60plus None
JLOC1JLOC1_50887.217138e-25631 - 69010060 / 60plus
JLOC1JLOC1_50887.117738e-25631 - 69010060 / 60plus
Harvest21ABC238966153e-25498 - 55710060 / 60plus
Harvest35U35_245306173e-25498 - 55710060 / 60plus



Contig Sequence (617 bp)

>U35_24530 617 Hv_44K_v2
CACAATGTCCAACGGCGCCATGCACCAACCGACGCCGGCTCCCGAGATGTGGAACTTCGC
GCCGGACGAGGCCCTCCTCGGCCTGTCGGCGCTGTCGGTGCGCTCCGTGCTGGGCAGCAT
CAAGGCCGGGATGGACCCGAGCGACGGCCGCCCCGTGATCCCGCTCGGGCACGGCGACCC
GTCGGCGTTCCCGTGCTTCCGCACTGCTCCGGAGGCCGTGGAAGCCGTCTCCGCCGCGCT
CCACTCCGGGATGCACAACTGCTACCCCACCGGCGTCGGCCTGGAGCCGGCGCGGCGCTC
CATCGCGCGTCACCTGTCCCTCGACCTGCCCTACGAGCTCTCCCCCGACGACGTCTACCT
CACGAGCGGCTGCTGCCAGGCGATCGAGATCGTCTGCTCCGTGCTCGCCGGCCGTCCCGG
CGCGGCCAGCAGCAACATCCTGCTCCCGCGGCCCGGGTGCCTGTTCTACGAGGCGCGCGC
CGCGTTCAACGGCATGGAGGCCCGCTACTTCCACCTCCTCCCGGACAGCGACTGGGAGGC
GGACCTCGACGCCGTGGAGGCCCTCGCCGACCGGAACACCGTCGCCATGGTCCTCGTCAA
CCCCGGCAACCCCTGCG



Homology of Contig U35_24530 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os11g35040.14433e-80protein|aminotransferase, classes I and II, domain containing protein, expressed
Brachypodium v1_2Bradi4g16430.23645e-89
Arabidopsis v10None