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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_6906_PI390587928Hv_44K_v2AAAGCAAGCAACTCCTCCGTTTCGAAATAGAAGCCTTTTAGAGATTTCAATACAAACTAT579GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.1701.1951.0101.1770.6300.683
Raw 14.30421.12517.62129.9415.1735.738



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC191826553e-25580 - 63910060 / 60plusABC19182
Harvest35U35_245326553e-25580 - 63910060 / 60plus



Contig Sequence (655 bp)

>U35_24532 655 Hv_44K_v2
TCTAGCTGATTCTGCACCTGCTATTCCTGCGGCTCTTCGCGTCGAGCCTAGACCCAAAAG
TGATATAAGGCAACGTGATCTCTTGAAGAAGATTGTCGAGATCAAACCAAAGCGAGCAAA
AGTCAGCAGCCCTCGACAAACAGCAGAGGGTGATAGACCTAAGCAGGAACAAGAAGATTC
TGTGAGGAAAATGTCTACCCCTGGGAACCAACCAGAATCATCTGAAGGTGAAAAGGGACC
GTCTCAAGGGGCGGTCAGCTTTCTGCAGCCTCTGTCAAAACCAGGTGATCCAGCGAAGGC
CCAGTCGCAAAATGCAGCTGTAAGCTTACTTGGTTTGGCGTATGAGAGTTCGGACGAGGA
ATAGCTGGTGGCGTGGAGAAATTGTTGTAGACTTTGTGTCAAAGTTTGTTCTTTTCTCTT
GCTGCGTGTTGTATCGTCAGAAGGATAAAGAACCTATGACGGCACTGATTAGGTGTCTCT
ACTGGAAATCAAGCCTGAGTTAATGATTGGGTAGACTATATATTCTTGCAGAACTATATA
TGTGATTGCTAATGTATAGAAGTAAATGAAATCTTCAGCAAAGCAAGCAACTCCTCCGTT
TCGAAATAGAAGCCTTTTAGAGATTTCAATACAAACTATAAAAAAAAAAAAAAAA



Homology of Contig U35_24532 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None