- Probe CUST_6894_PI390587928
- Source Contig U35_50804
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_6894_PI390587928 | Hv_44K_v2 | GTTCTTTGTTCCATCCTTGCAACGGAAAATGGGGATGCACATTTATATTCTAAGAAAAAA | 40 | GeneList: yellow MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 2.834 | 3.112 | 1.293 | 0.632 | 0.393 | 0.350 |
| Raw | 50.104 | 83.692 | 31.632 | 24.880 | 3.307 | 3.768 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest35 | U35_50804 | 106 | 3e-25 | 41 - 100 | 100 | 60 / 60 | plus |
Contig Sequence (106 bp)
>U35_50804 106 Hv_44K_v2 TCCTGTATCATCATGTACATTTACTATGCTTTGTATGTCTGTTCTTTGTTCCATCCTTGC AACGGAAAATGGGGATGCACATTTATATTCTAAGAAAAAAAAAAAA
Homology of Contig U35_50804 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |