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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_6766_PI390587928Hv_44K_v2TTTGATCTTGTGCTGCGGCAGGCGCAGCCTTTGAAACAAGGACTGTGTTGTGTTAAAAAA615GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.5021.4771.3300.9110.5070.409
Raw 78.653122.32094.34694.35519.39017.419



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC123266863e-25616 - 67510060 / 60plusABC12326
Harvest35U35_51006863e-25616 - 67510060 / 60plus



Contig Sequence (686 bp)

>U35_5100 686 Hv_44K_v2
GAGGCGTGTTGACAAGGGGGCGTCGCCAAAAATGTTGAACTGTCTAATGTACAAACTCTG
TTATTATCGATTTGGAGAACTGACCACAGAATATGGAAAACCTCCAGGATACGACCGAGT
GCGAGGAGTGGAGATAGGCAACAAAGACGTGAAGCTCGAGTACTTGGAGGAGGCATTCAC
AACATCAAACTGGATAGTGCGCATATACAAGGTCAAACCTCCAAAGAATAGATCCTAGGG
TTTCGTCCCAAGAGGGAAGTGGCAAGCGAGAGAGAACGGTTTGGGGGTGATTGCTTTGAC
ATTGGTCACATGAGGAGGGTGCCTAGTCGTGAACCTTTTGTTTTCGCAAGACTAACAGTA
ACCCATACTGTTGTTTCAAAGTTGAGGACCTGGTAGTTGTGATAGCTGGTCACTCATTTT
TGTTTGGCATACTGTGATGGAATTCTCGGAAACTTTTGGGTAGCAAGTAATTTTAGATCA
ATATGCCAGTTGACATTCCCTGGTGTTGGGTGTAGAAGATCTTTTTTCTTGGTTGCTGCC
TGTTTGCTTTTATAGCGTGATAGACAACCATTTTTTTTGTCTGTGTTAGCGTACCGATGG
TGTGATAGGCAAGCGTTTGATCTTGTGCTGCGGCAGGCGCAGCCTTTGAAACAAGGACTG
TGTTGTGTTAAAAAAAAAAAAAAAAA



Homology of Contig U35_5100 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None