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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_6703_PI390587928Hv_44K_v2CAGGCTGAAGGATGTTTCTTCTGTGATGAACCTGTTTATTCATTCTAAGCCTTATCATCA16GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_66289.328796e-241375 - 143310059 / 59plus ABC03694 ABC07678 ABC39688
MLOCMLOC_66289.238966e-241432 - 149010059 / 59plus ABC03694 ABC07678 ABC39688
JLOC1JLOC1_43667.128343e-241405 - 146310059 / 59minus
JLOC1JLOC1_43666.238923e-241482 - 154010059 / 59plus
Harvest21ABC0369415061e-241413 - 147110059 / 59plusABC03694
Harvest35U35_385154913e-2517 - 7610060 / 60minus
Harvest35U35_1565015561e-241452 - 151010059 / 59plus



Contig Sequence (491 bp)

>U35_38515 491 Hv_44K_v2
TTTTTTTTTTTTTTTTTGATGATAAGGCTTAGAATGAATAAACAGGTTCATCACAGAAGA
AACATCCTTCAGCCTGATCTTCTGGGATATGAGTTCATAGTAATTCATACAAGACTTCTT
CCTCGCACGCTCAATAAAGCCAGGCACTGGCCATATCCTCTAGGAGGCTAGCTGAAATAG
ATCCAACAACCGGGCACAACCTTTGCCTTATCAATTGATTTTGAGATGAGATCGAAGTCC
ATGTAGAAAAGGCCAATTTGCAAAGTGTAGAACACAAGATCCATCTTCTGGCCAATGGCT
ACAGTTTTTCCTTCAGTAACTTTAAGTTGTTCCAGTGCTTTTTCCTTCTCGCCAACCTTT
ACAAAGTACAAGGACTTGGCAAGATGGGCTTCACGCACTTCACTCTCGCCCAAGTTCTCT
TCAGCATCAGCAATTTTCTCATCGAGCTTGCGGATCTCCTCGTCGATCCGGGCGCGCATC
TCGGCGAGCAG



Homology of Contig U35_38515 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os04g40850.22353e-55protein|26S proteasome non-ATPase regulatory subunit 6, putative, expressed
Brachypodium v1_2Bradi3g47880.23944e-56
Arabidopsis v10None