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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_6547_PI390587928Hv_44K_v2ATGACCGTTAGATTAAAGAGGGGAAAGAGTTTTGCATGCTAAGACAACGTACGATTTTTT539GeneList: lightyellow
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.3620.4331.1961.6721.0551.139
Raw 3.2367.70223.05647.25910.97513.080



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_44016823e-25540 - 59910060 / 60plus



Contig Sequence (682 bp)

>U35_4401 682 Hv_44K_v2
GCGCCCACACNGACGCCGGCGGCATCATCCTGCTCCTGCAGGACGACGTGGTCGGCGGGC
TGGAGTTCTTCAGGGGCGACCGGGAGTGGGTCCCCGTGGGCCCCACCAAGGGCAGCAGAA
TCTTCGTCAACCTCGGGGACCAGCTGGAGGTGATGAGCGGCGGCGCCTACAGGAGCGTGC
TGCACCGCGTTGCCGCCGTCGCGGAAGGGCGCCGGCTGTCGGTGGCGACGTTCTACAACC
CCGGGGCGGAAGCCGTCGTGGCGCCGGCGCCCACGGCGAGGCAGGTGTACCCCGGGCCGT
ACAGGTTCGGCGACTACCTGGACTACTACCAGGGCACCAAGTTTGCCGACAAGGCGGCGA
GGTTGCAGGCCGTCAAGGAGCTGTTCGGCTCACGGATTCTGCCCGATTGACTGGGTGTGC
AGTGTGCGCGTTGTGTGCGGAGTTGGGTCGATTGTAGTTGTGAGATTTGTTTCTTTTTTC
GGAAAATCTACAGCGTACGCACGGAACAAACCAACCTGTCTAATCTAAGCATTTCAGGTA
TGACCGTTAGATTAAAGAGGGGAAAGAGTTTTGCATGCTAAGACAACGTACGATTTTTTT
TATGTTTGAAATTTAAAAAGTTTTTTCTATAAAACCATTAATTCAATCAATGATCCGTTT
TTATCAAAAAAAAAAAAAAAAA



Homology of Contig U35_4401 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os01g39860.13134e-67protein|1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed
Brachypodium v1_2Bradi2g41840.13312e-66
Arabidopsis v10None