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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_6507_PI390587928Hv_44K_v2TCGATCAAATCGCAGATTAAGGAGTCATTGCTGATACACTAGGATCTTCGTGGGTGATGC443GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_5938.429549e-222332 - 23939760 / 62minus ABC08248 ABC18711
MLOCMLOC_5938.527709e-222288 - 23499760 / 62minus ABC08248 ABC18711
MLOCMLOC_5938.624109e-221917 - 19789760 / 62minus ABC08248
MLOCMLOC_5938.259499e-225460 - 55219760 / 62minus ABC08248 ABC18711
MLOCMLOC_5938.159469e-225460 - 55219760 / 62minus ABC08248 ABC18711
MLOCMLOC_5938.351929e-224671 - 47329760 / 62minus ABC08248 ABC18711
JLOC1JLOC1_3855.255365e-22564 - 6259760 / 62plus
JLOC1JLOC1_3855.155415e-22569 - 6309760 / 62plus
JLOC1JLOC1_3854.151465e-224725 - 47869760 / 62minus
Harvest21ABC209029122e-22360 - 4219760 / 62plus
Harvest35U35_44415093e-25444 - 50310060 / 60plus
Harvest35U35_44409852e-22433 - 4949760 / 62plus



Contig Sequence (509 bp)

>U35_4441 509 Hv_44K_v2
TCGAGCACTGTTGGCCTATGGACCCCCAAAACCCAGAATCCCGCCTCTAAACCCTAGCCG
CCGGCGCTGCCCCTATTCCCCTCCCCCTCCTCCTCCGCAGTCTTCTTCCATTTGTCTGGG
AGGCGGGCAGGCGAGCGAGCGAGCGCGGAAGCATCCCCCGGCAGATTCGTTCTTCTGGTG
CAACAGTCATGGATATCACTCAGATTCTGCTAGCTGCTCAGTCTCCAGATGGTAACCTTC
GCTCAGCAGCAGAAGCCAACATCAAGCAGTTCCAGGAGCAGAATCTTCCCAACTTCCTCC
TATCCTTGTCGGTGGAGTTATCGAATGATGAAAGGCCACCAGAGTCTAGAAGACTTGCTG
GTATTATCCTTAAGAATTCACTGGACGCAGAAGATTCTGCAAGGAAGGAGCTGCTGATTC
AGCAATGGGTCAGCTTGGATCACTCGATCAAATCGCAGATTAAGGAGTCATTGCTGATAC
ACTAGGATCTTCGTGGGTGATGCCCGGCA



Homology of Contig U35_4441 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None