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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_6479_PI390587928Hv_44K_v2CTAGTGTTATTTTGGATTGTACGAGGGAGTAGAGAGGTTATGTAAATTTTCTTATGCGAA459GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_24040.18036e-24230 - 28810059 / 59minus ABC09923 ABC14625 ABC22075
JLOC1JLOC1_16562.16473e-24122 - 18010059 / 59minus
Harvest21ABC220755343e-2516 - 7510060 / 60minusABC22075
Harvest35U35_279215343e-25460 - 51910060 / 60plus



Contig Sequence (534 bp)

>U35_27921 534 Hv_44K_v2
GCACATACACAAACACGAACAAAGAAGAAGAAGAAGAGGAGGGAGGGCAACACAGGTAAA
GCCATGGAGTACTACCAACACACCAACAGCGGCATCAGCAACCACGGCGGCACAAAGGAG
AAGAGGCCACCGCTGAAGAGGGGGCAGCTGAAGCGGCAGATCATCAGGACCATCAGCAAC
CTCGTGCTGCCGAGGAATGACGGCGCGGGCGCAGAGAAGCGAGCAGCAGGTCGCGCCGGC
TTCGGCACCTACAACTGAACCTCTCCAAACCACATCGATTTTCAGTCAAGGCTCTAGAGT
CTAGACTAGAGCAGTACCTGTACCTGCTGTACACGTTAACTTCCTCCCATTCCTTCAGAC
CTTCCTTGGGTTCTTAATTAGGTTTTTTTTTTAGAAAAGAAAGAAGACCCCGGCCTATGC
GTCTGCAGGGTTCTGAATTAGGTGAGAAACCGTTTCATACTAGTGTTATTTTGGATTGTA
CGAGGGAGTAGAGAGGTTATGTAAATTTTCTTATGCGAAAAAAAAAAAAAAAAA



Homology of Contig U35_27921 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None