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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_6191_PI390587928Hv_44K_v2TGCACTATTAATGTTACAGATTTGTAGCTGAAACAATAAGACTAGTTGCAACTTGTGGCG283GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35868922853e-222172 - 222710056 / 56plus None
MLOCMLOC_6919.1139853e-223770 - 382510056 / 56minus ABC12070
MLOCMLOC_6919.531903e-222975 - 303010056 / 56minus ABC12070 ABC21816
MLOCMLOC_6919.332423e-223027 - 308210056 / 56minus ABC12070
MLOCMLOC_6919.622393e-222023 - 207810056 / 56minus ABC12070 ABC21816
MLOCMLOC_6919.737233e-223507 - 356210056 / 56minus ABC12070 ABC21816
MLOCMLOC_6919.1528213e-222606 - 266110056 / 56minus ABC12070
JLOC1JLOC1_4552.232341e-222364 - 241910056 / 56plus
JLOC1JLOC1_4552.137321e-222862 - 291710056 / 56plus
JLOC1JLOC1_4551.627291e-222165 - 222010056 / 56minus
JLOC1JLOC1_4551.539451e-223381 - 343610056 / 56minus
JLOC1JLOC1_4551.427421e-222178 - 223310056 / 56minus
JLOC1JLOC1_4551.333681e-222804 - 285910056 / 56minus
JLOC1JLOC1_4551.230831e-222519 - 257410056 / 56minus
JLOC1JLOC1_4551.138221e-223258 - 331310056 / 56minus
Harvest35U35_355063713e-25284 - 34310060 / 60plus



Contig Sequence (371 bp)

>U35_35506 371 Hv_44K_v2
GGTTCACACAAGTTCACAGTGCCAGAGTTCACCTTCAGCCGCTGCTACTCCGACCTGACC
GACGACTCGTCGTTGCTGGTGCAGGCCGTCGAGCTCTCTGGGCCAAGATGACTTGGTCAC
CAAGTGACCATAAAATGAGAACACCAAGCAGCAGCCCTTGTACAGCATGATAATCCTATG
TAGATTTGGAAATAATCCAATACTGAGGTAAAGTATAAATAGTGATGTATGTATCTTAGA
TGAAGTGTACACAGGAGAGTGCCCCAACTCCCTGGGATGGTATTGCACTATTAATGTTAC
AGATTTGTAGCTGAAACAATAAGACTAGTTGCAACTTGTGGCGAAAAAAAAAACAAAAAA
AAAAAAAAAAA



Homology of Contig U35_35506 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None