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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_6111_PI390587928Hv_44K_v2ATGATGATGTTCGTCACTTGTAAATCAATTATGGGTGAATTAAAAGGGCATGGATGCCAC414GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_58422.224752e-2461 - 12010060 / 60minus ABC03392 ABC04521 ABC13653 ABC46696
MLOCMLOC_58422.127222e-2486 - 14510060 / 60minus ABC03392 ABC04521 ABC13653 ABC46696
JLOC1JLOC1_37952.124588e-252375 - 243410060 / 60plus
Harvest21ABC466963131e-2321 - 809859 / 60minusABC46696
Harvest35U35_50974943e-25415 - 47410060 / 60plus
Harvest35U35_50985058e-21416 - 4739756 / 58plus



Contig Sequence (494 bp)

>U35_5097 494 Hv_44K_v2
CCACGCGTCCGGTGGATCACTCCATCGTGCAGAGCTTCGTGATGGGCGGGAGGTTGACGG
CGACGTCGAGGGCGTACCCGACGGAGGCCATTTACGCGGCGGCGGGGGTCTACCTGTTCA
ACAATGCCACCAGCGCCGCCGTCATCGCTGAGAAGCTCGTCGTGCACGACATGGACTCGT
CGTACAACCAGATATTCACAGACGACGACTTGGTACTCGTCGATTAGACTGATCGCTTAC
AACAAGTTTTGAATTTTTTTTTGTTCGGTCTGTTGCTTCCTTTTTCTCTTGGACACATAG
TGGTGGAGTACCAGCCACTCATCTACCTATCATCTTGATTTATGTTCCTTGTTCTAGTTT
TGGTTTTAGTAAGATGAATTAGATGATGTTCATAAAAGGACTATGGTGTTGATGATGATG
ATGTTCGTCACTTGTAAATCAATTATGGGTGAATTAAAAGGGCATGGATGCCACAAAAAA
AAAAAAAAAAAAAA



Homology of Contig U35_5097 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None