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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_5624_PI390587928Hv_44K_v2TCAACTCAGGAGTCGAGTACAACAACAATACTACTATTGTCATGTGTCAGAGTTCTCCAT362GeneList: lightsteelblue1
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 18.2095.6911.2570.8120.3390.598
Raw 1161.684615.061113.673120.77216.88133.289



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35839420152e-241830 - 188910060 / 60plus ABC07944
MLOCMLOC_80912.328922e-242625 - 268410060 / 60plus ABC07944
MLOCMLOC_80912.232292e-243019 - 307810060 / 60plus ABC07944
JLOC1JLOC1_53856.121568e-251924 - 198310060 / 60plus
Harvest21ABC0794410793e-25981 - 104010060 / 60plusABC07944
Harvest35U35_5024693e-25363 - 42210060 / 60plus
Harvest35U35_42020603e-251823 - 188210060 / 60plus



Contig Sequence (469 bp)

>U35_502 469 Hv_44K_v2
CGGGAAGCTGGGCGCCATCGTGGGGTCGTTCGGGTTCCTGTACCTGGCGCAGAACCAGGA
CCCCAGCAAGGTGGACCACGGGTACAAGGCCGGCATCGGGGTCAAGAACTCGCTATTCAT
CCTCGCCGCCTGCAACTTCCTCGGCATGGCCTTCACCTTCTGCGCGCCCGAGTCCAACGG
CATCTCGCTCGAGGAGCTCTCCGGCGAGAACGACGACGAGTCGCCGGCGCCGGCGACGCA
CGCCAGGACGGTGCCCGTGTGAGACGTCGCCGTACGTCAGATATACTAGCATATGCTACC
GGTGGTATACTCTGCAGGTTTGGATGGATGTATGGGTGTTTTCTTTTTCTTGGTTGGGAC
GTTCAACTCAGGAGTCGAGTACAACAACAATACTACTATTGTCATGTGTCAGAGTTCTCC
ATGTTAATTAATTAATTAGAGTTTATGGTCGAAAAAAAAAAAAAAAAAA



Homology of Contig U35_502 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None