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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_5530_PI390587928Hv_44K_v2TCTTCACTGCTGCCTTTGTCAATGTAGTAATGTTTCTATTCGTTTCCAGGTGGAGGTGGT520GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.2931.2391.1030.8250.1570.386
Raw 235.318187.624158.328193.12612.61633.298



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC014906923e-25521 - 58010060 / 60plus
Harvest35U35_148376923e-25521 - 58010060 / 60plus



Contig Sequence (692 bp)

>U35_14837 692 Hv_44K_v2
AGTCTGAGAAGATCGCGACGGTGGTGAAGGCTGCCGGGATCAAGGTTGAGGCCTACTGGC
CAGCGCTCTTCGCCAAGCTCCTGGAGAAGAGGAGCGTCGATGACCTCATCCTCTCCGTCG
GATCTGGTAAACCTCTCCCGCTCTCACTGTTCTATTCTTCTGCAGTTTATACACGGCTTT
GATTCATTGCGCTGTTGTGAACTTCGTCGTAAATGTTTCATAATGTTGCCACTGCCTGTA
ATTTATGTAACGTACTTTGATCCGCTGCTTGATTAGTCTGTGCAACTGGAGAATTCATCA
CTTAACTTTATGTTAGTAAGCTTGAATTGGAGGATGATCTTCTTAGTCAGACTTGTAGAT
ATGCCTATTTAGCGGTTATGTATTCTGAATTTAATTTCACGTGTAAATTAATAGCCATTC
CTGTTTGACCAATCTGCGCATTGTAATAGTAGAGAGTGCTATTCGGGATCATTGTAATTT
ATCATGAGCAGAAGCAACAGTCGCTCTATGCTTTGTTTTATCTTCACTGCTGCCTTTGTC
AATGTAGTAATGTTTCTATTCGTTTCCAGGTGGAGGTGGTGCTCCAGCTGCTGCTGCTGC
CCCGGCTGCTGGTGGTGCTGCTCCCGCTGAAGAGAAGAAAGAAGAAAAGAAGGAGGAAGC
TAAGGAAGAGAGCGATGATGACATGGGCTTCA



Homology of Contig U35_14837 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None