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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_530_PI390587928Hv_44K_v2GATGTTTGTTGGCAGTTTTAGTTGCGACCCAAGATTAAATGATGGCAATTTTTGCTAAAA767GeneList: salmon
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 4.6292.9260.6320.6471.0900.971
Raw 30.12931.1833.9677.5403.1583.149



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
JLOC1JLOC1_26190.12476e-21122 - 1779855 / 56plus
Harvest21ABC157115363e-2514 - 7310060 / 60minus
Harvest35U35_69048403e-25768 - 82710060 / 60plus



Contig Sequence (840 bp)

>U35_6904 840 Hv_44K_v2
GTCCCCCGGGCTGCAGGCTACCAGTGGGGCCGCTCCATCTACGGTGCGCAACAACGTCCC
GGAGGAGAGCCCCCTCGCCGGCATCGGGTCCAACCTATGGAAGGAGCAGGACGCGCCCCT
CCGGTGGCTCGACGGCCGGCCACCACGCTCCGTGGTGTATGTAAATTTTGGGAGCATCGC
GGTGATGTCCAAGGAGCATATGCTGGAGTTCGCGTGGGGACTGGCCAACACCGGCTACGC
CTTCCTGTGGAACGTGCGGCCTGACCTCGTCAAGGGCGACGATGAGGCCGCACTTCCACC
GGAATTCTCCACGGCGACGGAGGGGCGGAGCATGCTGTCGACCTGGTGCCCGCAGGAGAA
GGTGCTGGAGCAGGAGGCCGTTGGGGTCTTCCTCACGCACTCCGGGTGGAACTCGTCGCT
GGAGGGCATATGCGGCGGCGTTCCGATGGTGTGTTGGCCCTTCTTCGCGGATCAGCAGAC
CAACTGTCGTTACAAGTGCACGGAGTGGGGCATCGGGATGGAGATCGGGGACGATGTGAA
GAGGACCGAGGTGGAGGCCCTCATACGGGAGGCCATGGAGGGAGACAAGGGGCGAGAGAT
GAGACGACGCGTGCTGGAGCTCTGGGAGAGCGCCGTGGCCTCTGCACGTCCTGGCGGAAG
GTCCATGCGCAATGTTGATCGGCTCATCCACGAGGTGTTGCTAGCCTGAAACAAGCAAAT
TAAGATGGTAAAAATAAAGGATATAAGGCAGACCTTCGCTGAAAAGGGATGTTTGTTGGC
AGTTTTAGTTGCGACCCAAGATTAAATGATGGCAATTTTTGCTAAAAAAAAAAAAAAAAA



Homology of Contig U35_6904 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os08g31200.14983e-124protein|cytokinin-O-glucosyltransferase 2, putative, expressed
Brachypodium v1_2Bradi5g06377.14914e-133
Arabidopsis v10AT1G22370.24791e-82| Symbols: AtUGT85A5, UGT85A5 | UDP-glucosyl transferase 85A5 | chr1:7898116-7899879 REVERSE LENGTH=479