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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_5223_PI390587928Hv_44K_v2TTTGACTCTGTCTTGTACAAAATTTTTTGCTCCACGCATTTCCCAAATTATATGTCAAGC812GeneList: yellow
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.4271.9191.1810.7230.2290.248
Raw 308.089391.940209.718205.89722.26626.708



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC246908723e-25813 - 87210060 / 60plusABC24690
Harvest35U35_257098723e-25813 - 87210060 / 60plus



Contig Sequence (872 bp)

>U35_25709 872 Hv_44K_v2
CCCTATCACTCCTGATGAGATAGTCAAGTCAGGGCTGATGTCCAAGGAGGATTTTGATGA
GGCAAGAAGCAAAGCCTTAGGATTATTTGAGTATGGACAGCAAGTGGCATTAGAGAATGG
AGTAATTCTAGTTGACACAAAGTATGAGTTTGGAAAAACAGCTGATGGGACAATTGTGTT
GATCGATGAGATACATACACCTGACTCCAGCAGATATTGGATTGCTAATTCATATGAAGA
GAGATTCAAATCTGGCCTTGAACCTGAAAATGTTGACAAGGAGTTCTTAAGGCTGTGGTT
TAAGAATAATTGCAATCCATATGAAGATAAGGTTCTACCAGAAGCTCCTGAAGAACTAGT
TTCTGAACTTGCTTGGCGGTACATATTCCTGTTTGAAACAATTACAAATACAAAGTTTGA
GATCCCAGAAACACAGGAACCAATCCATGAAAGGATATCAAGGAACGTGGCACAAGCCTT
ACGGAATTTGTAATTGCTAACACTGGTAAAAGTGCTTGCTCATGACAATAAGAGGTGCAC
TTCTGCTACCTAGATTCTCCCCACTGAGCGGATAATCACATGAGCTATAAGCTGATGAGT
AATATCCTCCCCACTGAAGATTGGATTTATTTTAGACGGAGCAGGAGTGCAATGCCCGGT
TATGTAATACTATGGGAGAGTAGAGAAATAATTGAAATTGGCCGTTGACCTCCTGATGTT
TGGAGTGCTGGAGAAGATGAATGCAATATGCAACTTTCTATTACCTGTCTTGTGTAAAAG
TTGCAGAGCTCGCCCCAATTTTTGTTTGACCATTTGACTCTGTCTTGTACAAAATTTTTT
GCTCCACGCATTTCCCAAATTATATGTCAAGC



Homology of Contig U35_25709 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os09g29190.14043e-102protein|phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplast precursor, putative, expressed
Brachypodium v1_2Bradi5g14230.14003e-106
Arabidopsis v10AT3G21110.14113e-81| Symbols: PUR7, PURC, ATPURC | purin 7 | chr3:7402696-7405273 REVERSE LENGTH=411